RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 HORMAD2Q8N7B1 307 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 UXS1Q8NBZ7 420 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 SRFBP1Q8NEF9 429 aaKnown RBP14.87□□□□□ -0.03
HMGA1-202ENST00000347617 KXD1Q9BQD3 176 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 ZC4H2Q9NQZ6 224 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 CD84Q9UIB8 345 aa14.87□□□□□ -0.03
HMGA1-202ENST00000347617 PRAF2O60831 178 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 LALBAP00709 142 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 HOXD4P09016 255 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-202ENST00000347617 PPP2R1BP30154 601 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 BTCP35070 178 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 CAPZA2P47755 286 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 CCT3P49368 545 aaKnown RBP14.86□□□□□ -0.03
HMGA1-202ENST00000347617 ANXA11P50995 505 aaKnown RBP14.86□□□□□ -0.03
HMGA1-202ENST00000347617 MC1RQ01726 317 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 MAP4K2Q12851 820 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 CAMK2DQ13557 499 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 FGFBP1Q14512 234 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-202ENST00000347617 CDC73Q6P1J9 531 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 RASSF6Q6ZTQ3 369 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 TMPRSS11BQ86T26 416 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 BBS10Q8TAM1 723 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 SAP130Q9H0E3 1048 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 SERHL2Q9H4I8 314 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 ANKRD19PQ9H560 264 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 TBC1D17Q9HA65 648 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 ZNF624Q9P2J8 865 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-202ENST00000347617 P2RX2Q9UBL9 471 aa14.86□□□□□ -0.03
HMGA1-202ENST00000347617 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 hCG_1807616A0A1W2PRN6 198 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SMIM30A4D0T7 59 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 KRBOX1C9JBD0 128 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SEMA7AO75326 666 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 WDPCPO95876 746 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 IL3P08700 152 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 CHRM5P08912 532 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 F8A1P23610 371 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 LTBRP36941 435 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ZNF81P51508 661 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 CDH11P55287 796 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 PUDPQ08623 228 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ZNF155Q12901 538 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 TSPAN31Q12999 210 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 GNA13Q14344 377 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 LRRC32Q14392 662 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SLBPQ14493 270 aaKnown RBP eCLIP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 AGERQ15109 404 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 LGALSLQ3ZCW2 172 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 RPS26P11Q5JNZ5 115 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SLC22A10Q63ZE4 541 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ABI3BPQ7Z7G0 1075 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 IQCHQ86VS3 1027 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 MORN4Q8NDC4 146 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 WDR48Q8TAF3 677 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SLC9A6Q92581 669 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ZNF514Q96K75 400 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 TMED9Q9BVK6 235 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ZCCHC2Q9C0B9 1178 aaKnown RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SLC6A16Q9GZN6 736 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 RSPH9Q9H1X1 276 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 NUDT15Q9NV35 164 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 TAAR2Q9P1P5 351 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 A0A1W2PRG6 482 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ANKDD1BA6NHY2 528 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 M0R233 179 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 TSPAN6O43657 245 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SCO1O75880 301 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ADH1BP00325 375 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 PAHP00439 452 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 CELP19835 753 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 DDCP20711 480 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 PRLHRP49683 370 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 DLX2Q07687 328 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 TMEM115Q12893 351 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 IDNKQ5T6J7 187 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 ARSKQ6UWY0 536 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 OR11H4Q8NGC9 324 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 OR56B4Q8NH76 319 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 NEIL2Q969S2 332 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 RBP7Q96R05 134 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 SECISBP2Q96T21 854 aaKnown RBP14.85□□□□□ -0.03
HMGA1-202ENST00000347617 MVB12BQ9H7P6 319 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 DLL4Q9NR61 685 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 PTGFRNQ9P2B2 879 aa14.85□□□□□ -0.03
HMGA1-202ENST00000347617 A0A1W2PPL8 197 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 GTPBP1O00178 669 aaKnown RBP14.84□□□□□ -0.03
HMGA1-202ENST00000347617 GPR171O14626 319 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SH3BGRLO75368 114 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 NCR1O76036 304 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SOX30O94993 753 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 H2AFB2P0C5Z0 115 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 C5AR1P21730 350 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 LCN1P31025 176 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 DHODHQ02127 395 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 DYRK1AQ13627 763 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 HTR4Q13639 388 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms