RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 BEST3Q8N1M1 668 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 SLC15A4Q8N697 577 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 OR52E4Q8NGH9 312 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 OR52P1PQ8NH57 321 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 NODALQ96S42 347 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 RTN4RQ9BZR6 473 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 IGF2RP11717 2491 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 NINQ8N4C6 2090 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 TCRBV3S1A0A5B6 114 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 BCAS1O75363 584 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 PRKD3O94806 890 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 OXSR1O95747 527 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF682O95780 498 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 PABPC4LP0CB38 370 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 NAGAP17050 411 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 TNFRSF1BP20333 461 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 KRT20P35900 424 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 AP2B1P63010 937 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 PLAURQ03405 335 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF141Q15928 474 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 PDZK1Q5T2W1 519 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 IL20RBQ6UXL0 311 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 EIF3MQ7L2H7 374 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ARMC8Q8IUR7 673 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 OR10G3Q8NGC4 313 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ASB15Q8WXK1 588 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZCCHC14Q8WYQ9 949 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 SPACA9Q96E40 222 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF354BQ96LW1 612 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 LRGUKQ96M69 825 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF607Q96SK3 696 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 WFDC6Q9BQY6 131 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 OLAHQ9NV23 265 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ANKRD10Q9NXR5 420 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 GPR83Q9NYM4 423 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 MRTO4Q9UKD2 239 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF443Q9Y2A4 671 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 DMXL2Q8TDJ6 3036 aa17.45■□□□□ 0.38
CHMP4A-201ENST00000347519 AQP12BA6NM10 295 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 C17orf51A8MQB3 221 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 K7ENP7 123 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ENTPD5O75356 428 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 PDE9AO76083 593 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 F10P00742 488 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 PSMD4P55036 377 aaKnown RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 PSPHP78330 225 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ELF3P78545 371 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 NTRK2Q16620 822 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF311Q5JNZ3 666 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 INO80CQ6PI98 192 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF836Q6ZNA1 936 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 LRRC69Q6ZNQ3 347 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 LINC00696Q6ZRV3 163 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF227Q86WZ6 799 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 KRT73Q86Y46 540 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 APLFQ8IW19 511 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 AQP12AQ8IXF9 295 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ADGRG5Q8IZF4 528 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 CLIP4Q8N3C7 705 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 FDCSPQ8NFU4 85 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 SPPL2AQ8TCT8 520 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 TPD52L3Q96J77 140 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 TRIM15Q9C019 465 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF552Q9H707 407 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 STMN3Q9NZ72 180 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 SEC14L3Q9UDX4 400 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 ZMIZ1Q9ULJ6 1067 aa17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 RRP15Q9Y3B9 282 aaKnown RBP17.44■□□□□ 0.38
CHMP4A-201ENST00000347519 PRAMEF25A6NGN4 478 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 FADS1O60427 444 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 SERPINB7O75635 380 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 DBIP07108 87 aaKnown RBP17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 C8BP07358 591 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 TBXA2RP21731 343 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 KCNJ5P48544 419 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 SELENOWP63302 87 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 EEF1A1P68104 462 aaKnown RBP17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 EFR3AQ14156 821 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 KLHL26Q53HC5 615 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 BROXQ5VW32 411 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 BICRALQ6AI39 1079 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 OPN5Q6U736 354 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 NUP54Q7Z3B4 507 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 PEX5LQ8IYB4 626 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 EID3Q8N140 333 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 OR4D11Q8NGI4 311 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 SLC26A7Q8TE54 656 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 GRHL3Q8TE85 626 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 RNF138Q8WVD3 245 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 SLCO4A1Q96BD0 722 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 HSH2DQ96JZ2 352 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 UBQLN4Q9NRR5 601 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 RLIMQ9NVW2 624 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 PLA2G3Q9NZ20 509 aa17.43■□□□□ 0.38
CHMP4A-201ENST00000347519 A0A087WV48 116 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 SUV39H1O43463 412 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 OIP5O43482 229 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 STAMBPO95630 424 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 LCN1P31025 176 aa17.42■□□□□ 0.38
CHMP4A-201ENST00000347519 PTGDSP41222 190 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms