RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SERTAD2Q14140 314 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 NDUFAF6Q330K2 333 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 ZNF721Q8TF20 911 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 CNOT9Q92600 299 aaKnown RBP12.56□□□□□ -0.4
CDC42-202ENST00000344548 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
CDC42-202ENST00000344548 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 RBM38Q9H0Z9 239 aaKnown RBP12.56□□□□□ -0.4
CDC42-202ENST00000344548 FTSJ1Q9UET6 329 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 MMACHCQ9Y4U1 282 aa12.56□□□□□ -0.4
CDC42-202ENST00000344548 ARRDC5A6NEK1 342 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 H3BSA7 217 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 FAAHO00519 579 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 NTN3O00634 580 aaPredicted RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 SCRG1O75711 98 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 DBIP07108 87 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 THBS1P07996 1170 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 CDH2P19022 906 aaPredicted RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 EEF1B2P24534 225 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 POU1F1P28069 291 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 GGT2P36268 569 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 IL18R1Q13478 541 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 AP1ARQ63HQ0 302 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 GDF7Q7Z4P5 450 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 BCORP1Q8N888 145 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 SLC2A12Q8TD20 617 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 GFM1Q96RP9 751 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 NUDT9Q9BW91 350 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 NXF5Q9H1B4 397 aaKnown RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 AMBNQ9NP70 447 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 SLC13A4Q9UKG4 626 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 NUP210LQ5VU65 1888 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 FREM2Q5SZK8 3169 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 A0A087WXM4 84 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 CDC14CA4D256 554 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 D6RAR5 112 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 ANGPTL1O95841 491 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 SYPP08247 313 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 CCNYL3P0C7X3 344 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 CCL4P13236 92 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 ZNF28P17035 718 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 ACY1Q03154 408 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 PARP8Q8N3A8 854 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 TMEM255BQ8WV15 326 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
CDC42-202ENST00000344548 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 FANCEQ9HB96 536 aa12.55□□□□□ -0.4
CDC42-202ENST00000344548 NPIPB9F8W1W9 429 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 PIP5K1CO60331 668 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 ADAP00813 363 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 KRT20P35900 424 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 CRISP1P54107 249 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 CLDN6P56747 220 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 TUBA4AP68366 448 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 ZNHIT3Q15649 155 aaPredicted RBP12.54□□□□□ -0.4
CDC42-202ENST00000344548 NKAIN1Q4KMZ8 207 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 RBM48Q5RL73 367 aaKnown RBP12.54□□□□□ -0.4
CDC42-202ENST00000344548 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 SLC41A3Q96GZ6 507 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 PRSS27Q9BQR3 290 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 UCK2Q9BZX2 261 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 SLC7A5P2Q9GIP4 190 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 LIN28AQ9H9Z2 209 aaKnown RBP12.54□□□□□ -0.4
CDC42-202ENST00000344548 KLHL28Q9NXS3 571 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 CNIH4Q9P003 139 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 CBLCQ9ULV8 474 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 SLC7A7Q9UM01 511 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 LYPD3O95274 346 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 ZGLP1P0C6A0 271 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 GABRB1P18505 474 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 GALNSP34059 522 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 MVKQ03426 396 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 NEDD8Q15843 81 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 C1orf94Q6P1W5 598 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 PLEKHM3Q6ZWE6 761 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 KIF18BQ86Y91 864 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 C9orf40Q8IXQ3 194 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 APOL4Q9BPW4 351 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 KLHDC3Q9BQ90 382 aa12.54□□□□□ -0.4
CDC42-202ENST00000344548 YTHDF1Q9BYJ9 559 aaKnown RBP12.54□□□□□ -0.4
CDC42-202ENST00000344548 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms