RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NDST2P52849 883 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SPIBQ01892 262 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 EPGNQ6UW88 154 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF730Q6ZMV8 503 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 WDR88Q6ZMY6 472 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BBS10Q8TAM1 723 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLIRPQ9GZT3 109 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 EBF1Q9UH73 591 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BOLA1Q9Y3E2 137 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TCAF2A6NFQ2 919 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MFSD2BA6NFX1 497 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 IGHV2-70P01814 119 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MGMTP16455 207 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 USF1P22415 310 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PTGIRP43119 386 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CLK2P49760 499 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BLKP51451 505 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 XKP51811 444 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF791Q3KP31 576 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CYBRD1Q53TN4 286 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PHF19Q5T6S3 580 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CDC42BPGQ6DT37 1551 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 DHRS7BQ6IAN0 325 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GCNT7Q6ZNI0 430 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CLIP4Q8N3C7 705 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 UBA3Q8TBC4 463 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ACTL8Q9H568 366 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM8AQ9HCN3 771 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SIRT7Q9NRC8 400 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BTRCQ9Y297 605 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FAM234BA2RU67 622 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 H3BQ06 376 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 EPOP01588 193 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 IL5P05113 134 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PPOXP50336 477 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ADARB1P78563 741 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM151AQ8N4L1 468 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NEIL3Q8TAT5 605 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 UBTD1Q9HAC8 227 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OAZ3Q9UMX2 235 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MT-CYBP00156 380 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GRPRP30550 384 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MARCH8Q5T0T0 291 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FAM3CQ92520 227 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SUSD6Q92537 303 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 UBE2FQ969M7 185 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF107Q9UII5 783 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CHD2O14647 1828 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 DENND4BO75064 1496 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 E5RGE8 158 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ANKRD28O15084 1053 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF623O75123 536 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 HOXC6P09630 235 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF84P51523 738 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CCR6P51684 374 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CCR9P51686 369 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TNFRSF17Q02223 184 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PNRC1Q12796 327 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OR1J2Q8NGS2 313 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FIBINQ8TAL6 211 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CHIAQ9BZP6 476 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RNF24Q9Y225 148 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ARHGAP8P85298 464 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SGO1Q5FBB7 561 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 XKR4Q5GH76 650 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NEK7Q8TDX7 302 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MFSD3Q96ES6 412 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MARS2Q96GW9 593 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SYT3Q9BQG1 590 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RSG1Q9BU20 258 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 KLRF2D3W0D1 207 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 APOC4-APOC2K7ER74 178 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 APOC2P02655 101 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 AHRP35869 848 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GPR12P47775 334 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NUBP1P53384 320 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 KLF3P57682 345 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TIMM10P62072 90 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SHC2P98077 582 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BDH1Q02338 343 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BSXQ3C1V8 233 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ARSIQ5FYB1 569 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OIT3Q8WWZ8 545 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A21Q9BQT8 299 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MXRA8Q9BRK3 442 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CWH43Q9H720 699 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZDHHC4Q9NPG8 344 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLC17A7Q9P2U7 560 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SH2B3Q9UQQ2 575 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GCGP01275 180 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 INSRRP14616 1297 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CLCN7P51798 805 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MAD2L1BPQ15013 274 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM185AQ8NFB2 350 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ADGRG7Q96K78 797 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLC30A3Q99726 388 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLC32A1Q9H598 525 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 AGO1Q9UL18 857 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PRG4Q92954 1404 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms