RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
CTSL-201ENST00000340342 DEFB127Q9H1M4 99 aa12.98□□□□□ -0.33
CTSL-201ENST00000340342 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
CTSL-201ENST00000340342 SLC25A37Q9NYZ2 338 aa12.98□□□□□ -0.33
CTSL-201ENST00000340342 WIF1Q9Y5W5 379 aa12.98□□□□□ -0.33
CTSL-201ENST00000340342 A0A1B0GUH1 482 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 ACOT7O00154 380 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 HMGN4O00479 90 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 CDC40O60508 579 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTSL-201ENST00000340342 DCTN3O75935 186 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 PDE9AO76083 593 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 SNRPB2P08579 225 aaKnown RBP12.97□□□□□ -0.33
CTSL-201ENST00000340342 RNF144AP50876 292 aaPredicted RBP12.97□□□□□ -0.33
CTSL-201ENST00000340342 MVDP53602 400 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 FUT5Q11128 374 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 STX5Q13190 355 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 SNTA1Q13424 505 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 C4orf17Q53FE4 359 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 C16orf62Q7Z3J2 963 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 MARCH3Q86UD3 253 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 SSC4DQ8WTU2 575 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 TMEM41AQ96HV5 264 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 SDF2Q99470 211 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 TPT1P8Q9HAU6 139 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
CTSL-201ENST00000340342 PCDHGB3Q9Y5G1 929 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 LIPGQ9Y5X9 500 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 DIDO1Q9BTC0 2240 aaKnown RBP12.97□□□□□ -0.33
CTSL-201ENST00000340342 HEATR5AQ86XA9 2040 aa12.97□□□□□ -0.33
CTSL-201ENST00000340342 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 DUXAA6NLW8 204 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 SNPHO15079 494 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 ANGPT2O15123 496 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 KRT75O95678 551 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 OXSR1O95747 527 aaPredicted RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 ETFAP13804 333 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 ATP6V1C1P21283 382 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 GDF1P27539 372 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 LRIF1Q5T3J3 769 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 TIGD3Q6B0B8 471 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 MYO7BQ6PIF6 2116 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 MTDHQ86UE4 582 aaKnown RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 GHDCQ8N2G8 530 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 FAM109AQ8N4B1 249 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 WDSUB1Q8N9V3 476 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 GATSQ8NAP1 163 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 CHDHQ8NE62 594 aaPredicted RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 OR1J4Q8NGS1 313 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 RELTQ969Z4 430 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 TBL1XR1Q9BZK7 514 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 VAPAQ9P0L0 249 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 LEF1Q9UJU2 399 aaPredicted RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 ABCG2Q9UNQ0 655 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 C15orf41Q9Y2V0 281 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 UTP20O75691 2785 aaKnown RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 PTPN13Q12923 2485 aa12.96□□□□□ -0.33
CTSL-201ENST00000340342 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.33
CTSL-201ENST00000340342 TRBV5-3A0A0A0MS03 114 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 CENPVL1A0A0U1RR11 272 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 CLIC1O00299 241 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 EBAG9O00559 213 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 FBP2O00757 339 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 LRRTM2O43300 516 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 FCMRO60667 390 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 CCDC22O60826 627 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 TBXA2RP21731 343 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 CRATP43155 626 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 SYPL1Q16563 259 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 DLEU7Q6UYE1 221 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 DHDDSQ86SQ9 333 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 SNX32Q86XE0 403 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 SPPL2CQ8IUH8 684 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 PSMG3-AS1Q96PY0 264 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 TRIM8Q9BZR9 551 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 UBQLN3Q9H347 655 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 IKZF5Q9H5V7 419 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 UBQLN4Q9NRR5 601 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 EXD2Q9NVH0 621 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 PPP4R1LQ9P1A2 415 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 FBXL2Q9UKC9 423 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 ZNF835Q9Y2P0 537 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 CAPN7Q9Y6W3 813 aa12.96□□□□□ -0.34
CTSL-201ENST00000340342 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
CTSL-201ENST00000340342 LOC100653049A0A140TA62 436 aa12.95□□□□□ -0.34
CTSL-201ENST00000340342 ALG1L2C9J202 215 aa12.95□□□□□ -0.34
CTSL-201ENST00000340342 GMFGO60234 142 aa12.95□□□□□ -0.34
CTSL-201ENST00000340342 SLC19A2O60779 497 aa12.95□□□□□ -0.34
CTSL-201ENST00000340342 TRAPPC6AO75865 159 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms