RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 EMDP50402 254 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 IDH3GP51553 393 aaPredicted RBP13.4□□□□□ -0.26
TSPO-202ENST00000337554 RWDD2BP57060 319 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 IL2P60568 153 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 COL10A1Q03692 680 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 CHRNEQ04844 493 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 DUSP2Q05923 314 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 ZNF239Q16600 458 aaKnown RBP13.4□□□□□ -0.26
TSPO-202ENST00000337554 PRICKLE4Q2TBC4 344 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
TSPO-202ENST00000337554 REC114Q7Z4M0 266 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 ZCCHC24Q8N2G6 241 aaKnown RBP13.4□□□□□ -0.26
TSPO-202ENST00000337554 RNF175Q8N4F7 328 aa13.4□□□□□ -0.26
TSPO-202ENST00000337554 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 CBFA2T2O43439 604 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 PTMSP20962 102 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 NT5EP21589 574 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 PSMA4P25789 261 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 PPOXP50336 477 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 LOXL3P58215 753 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 POU4F1Q01851 419 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 THOC5Q13769 683 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 OSTF1Q92882 214 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 SRXN1Q9BYN0 137 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 RASSF4Q9H2L5 321 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 PLK3Q9H4B4 646 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 ANKZF1Q9H8Y5 726 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 ZMAT3Q9HA38 289 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
TSPO-202ENST00000337554 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 FLRT3Q9NZU0 649 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 BCAP29Q9UHQ4 241 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 CFL2Q9Y281 166 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 TRAF6Q9Y4K3 522 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 PCDHB14Q9Y5E9 798 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 CORINQ9Y5Q5 1042 aa13.39□□□□□ -0.27
TSPO-202ENST00000337554 A0A0A6YYD5 115 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 SDR42E2A6NKP2 422 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 TIMM23O14925 209 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 FADS1O60427 444 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 RAD51DO75771 328 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 YES1P07947 543 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 EPORP19235 508 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 EVI2BP34910 448 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 SERPINF1P36955 418 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 LMO4P61968 165 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 STX5Q13190 355 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 EFR3AQ14156 821 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
TSPO-202ENST00000337554 FAM189A2Q15884 450 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 HBMQ6B0K9 141 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 ESPNLQ6ZVH7 1005 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 LARP4Q71RC2 724 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■■□ 26.6
TSPO-202ENST00000337554 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 WDR60Q8WVS4 1066 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
TSPO-202ENST00000337554 NARFLQ9H6Q4 476 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 GP6Q9HCN6 339 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 TREM2Q9NZC2 230 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 OPN4Q9UHM6 478 aa13.38□□□□□ -0.27
TSPO-202ENST00000337554 DNAH9Q9NYC9 4486 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
TSPO-202ENST00000337554 KNG1P01042 644 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 CPMP14384 443 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 DDX5P17844 614 aaKnown RBP13.37□□□□□ -0.27
TSPO-202ENST00000337554 FPR2P25090 351 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 SHC1P29353 583 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 XKP51811 444 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 PNLIPRP2P54317 469 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 CORO7P57737 925 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 CDKL1Q00532 357 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 BRICD5Q6PL45 260 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 OR52R1Q8NGF1 315 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 UBASH3BQ8TF42 649 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 DUSP19Q8WTR2 217 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 ZNF669Q96BR6 464 aaPredicted RBP13.37□□□□□ -0.27
TSPO-202ENST00000337554 EFHD2Q96C19 240 aaPredicted RBP13.37□□□□□ -0.27
TSPO-202ENST00000337554 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
TSPO-202ENST00000337554 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 RAB1BQ9H0U4 201 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 CXorf36Q9H7Y0 433 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 PTGES2Q9H7Z7 377 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 KLHL21Q9UJP4 597 aa13.37□□□□□ -0.27
TSPO-202ENST00000337554 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms