RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MDGA1Q8NFP4 955 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 OR4K14Q8NGD5 310 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 OR10K1Q8NGX5 313 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 LRIG1Q96JA1 1093 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 GPN3Q9UHW5 284 aaPredicted RBP15.17■□□□□ 0.02
NPHP3-201ENST00000337331 GNG8Q9UK08 70 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 SCML1Q9UN30 329 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 TRAPPC4Q9Y296 219 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 PCDHGA9Q9Y5G4 932 aaKnown RBP15.17■□□□□ 0.02
NPHP3-201ENST00000337331 BACE2Q9Y5Z0 518 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 RFXAPO00287 272 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ZP3P21754 424 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 PITPNBP48739 271 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 GPR176Q14439 515 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 NAGSQ8N159 534 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ZNF527Q8NB42 609 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 SYT14Q8NB59 555 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 PHOSPHO1Q8TCT1 267 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 MFFQ9GZY8 342 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ZFC3H1O60293 1989 aaKnown RBP15.17■□□□□ 0.02
NPHP3-201ENST00000337331 E7EQ34 232 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ZNF432O94892 652 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 SCG5P05408 212 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 RRASP10301 218 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 HOXB2P14652 356 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 CCKBRP32239 447 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 DEFB134Q4QY38 66 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
NPHP3-201ENST00000337331 FCRL1Q96LA6 429 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 UBXN10Q96LJ8 280 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 PRRG4Q9BZD6 226 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 TAS2R10Q9NYW0 307 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 SCAMP2O15127 329 aaKnown RBP15.17■□□□□ 0.02
NPHP3-201ENST00000337331 TCRBP04435 133 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 GCGRP47871 477 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 CCR6P51684 374 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 S100A12P80511 92 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 P2RY14Q15391 338 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 Q6ZSR9 355 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 CNTN4Q8IWV2 1026 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 OR8D4Q8NGM9 314 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 THEM6Q8WUY1 208 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 SMPDL3BQ92485 455 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 IKZF5Q9H5V7 419 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 ERVK-19Q9WJR5 959 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 PLEKHA6Q9Y2H5 1048 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
NPHP3-201ENST00000337331 A0A1B0GVT2 93 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 RGRP47804 291 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 CLDN20P56880 219 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 MGAT3Q09327 533 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ARFRP1Q13795 201 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 CLLU1OSQ5K130 101 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 LYPD4Q6UWN0 246 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 SVBPQ8N300 66 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 BBS10Q8TAM1 723 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 DPH7Q9BTV6 452 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 CXCL16Q9H2A7 254 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 CSNK1G1Q9HCP0 422 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 UFSP2Q9NUQ7 469 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ASH2LQ9UBL3 628 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 NPIPB15A6NHN6 443 aaPredicted RBP15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ANHXE9PGG2 379 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 TLX3O43711 291 aaPredicted RBP15.16■□□□□ 0.02
NPHP3-201ENST00000337331 LCMT2O60294 686 aaKnown RBP15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ZNF35P13682 527 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 SDHBP21912 280 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 OR3A2P47893 321 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 RIPPLY1Q0D2K3 151 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 NXPE4Q6UWF7 544 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 TMED4Q7Z7H5 227 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 OR2L5Q8NG80 312 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 GNPDA2Q8TDQ7 276 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 DOK4Q8TEW6 326 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 TMEM19Q96HH6 336 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ARPC1BO15143 372 aaKnown RBP15.16■□□□□ 0.02
NPHP3-201ENST00000337331 TNK1Q13470 666 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 ELAVL3Q14576 367 aaKnown RBP15.16■□□□□ 0.02
NPHP3-201ENST00000337331 AVPI1Q5T686 147 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 FBXO42Q6P3S6 717 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 KLBQ86Z14 1044 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 JAGN1Q8N5M9 183 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 EGLN2Q96KS0 407 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 BTAF1O14981 1849 aa15.16■□□□□ 0.02
NPHP3-201ENST00000337331 FEZF1A0PJY2 475 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 FLRT2O43155 660 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 CCL5P13501 91 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 SLC6A6P31641 620 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 PYCR1P32322 319 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 SOX2P48431 317 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 SRP9P49458 86 aaKnown RBP15.15■□□□□ 0.02
NPHP3-201ENST00000337331 CEBPGP53567 150 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 ALKBH2Q6NS38 261 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 ZER1Q7Z7L7 766 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 CLDN22Q8N7P3 220 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 INO80EQ8NBZ0 244 aaPredicted RBP15.15■□□□□ 0.02
NPHP3-201ENST00000337331 NUP43Q8NFH3 380 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 OR4K5Q8NGD3 323 aa15.15■□□□□ 0.02
NPHP3-201ENST00000337331 ADAMTS19Q8TE59 1207 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms