RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SLC14A2Q15849 920 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 CPZQ66K79 652 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SFRP4Q6FHJ7 346 aaPredicted RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 PLBD1Q6P4A8 553 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PGAP1Q75T13 922 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SVBPQ8N300 66 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 FIBINQ8TAL6 211 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PGAP3Q96FM1 320 aaPredicted RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 MKRN2Q9H000 416 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 TEX10Q9NXF1 929 aaPredicted RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SPO11Q9Y5K1 396 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 IRS2Q9Y4H2 1338 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RPS10-NUDT3A0A1W2PQS6 291 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 HOXD12P35452 270 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 HTRA4P83105 476 aaPredicted RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 LRP8Q14114 963 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TBC1D20Q96BZ9 403 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 VPS25Q9BRG1 176 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RBCK1Q9BYM8 510 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RDH14Q9HBH5 336 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TXNL4BQ9NX01 149 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 GJB5O95377 273 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SELENOWP63302 87 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 LCTLQ6UWM7 567 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 NRMQ8IXM6 262 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 GPR83Q9NYM4 423 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 UBFD1O14562 309 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 ADAMTS4O75173 837 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 NTSR1P30989 418 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 RAB39BQ96DA2 213 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 BSCL2Q96G97 398 aaPredicted RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 FAM46AQ96IP4 442 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 ZFYVE21Q9BQ24 234 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 ARHGAP39Q9C0H5 1083 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TRAV18A0A075B6X5 111 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 LOC285095A0A1B0GVY8 99 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SEC14L2O76054 403 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 CNR2P34972 360 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 HOXD13P35453 343 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 STT3AP46977 705 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SPOCK1Q08629 439 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 CST6Q15828 149 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SLC5A8Q8N695 610 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 OR4K13Q8NH42 304 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 CENPOQ9BU64 300 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SDR39U1Q9NRG7 319 aaPredicted RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 PCDHGA5Q9Y5G8 931 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 A0A1W2PS29 197 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 GKP32189 559 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 RAB40BQ12829 278 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 OR4D1Q15615 310 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 KDELC1Q6UW63 502 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 NLKQ9UBE8 527 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 A0A1W2PPK0 400 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 FAM72CH0Y354 149 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 EGFP01133 1207 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 RAB3AP20336 220 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 BDH1Q02338 343 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 KIAA1211LQ6NV74 962 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 ENPP6Q6UWR7 440 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 METTL27Q8N6F8 245 aaPredicted RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 DIO2Q92813 273 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 CNOT2Q9NZN8 540 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 FER1L4A9Z1Z3 1794 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 TPPPO94811 219 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 DDCP20711 480 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 GATMP50440 423 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 HNRNPFP52597 415 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 NFATC4Q14934 902 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 POU4F3Q15319 338 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 CNN3Q15417 329 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 TMEM244Q5VVB8 128 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SERPINA11Q86U17 422 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 ADAMTS14Q8WXS8 1223 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 DAZAP1Q96EP5 407 aaKnown RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 DPH2Q9BQC3 489 aaPredicted RBP12.37□□□□□ -0.43
HLCS-201ENST00000336648 NT5DC2Q9H857 520 aa12.37□□□□□ -0.43
HLCS-201ENST00000336648 SDHAF2Q9NX18 166 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms