RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SEC14L3Q9UDX4 400 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 MDC1Q14676 2089 aaKnown RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 A0A1W2PQU0 124 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 TCRBV16S1A1N1A0A5B0 115 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 ZNF98A6NK75 572 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 C5orf67F2Z3F1 127 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 H0Y8X5 98 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 ACSM4P0C7M7 580 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 NCBP2P52298 156 aaKnown RBP eCLIP13.02□□□□□ -0.332e-7■□□□□ 9.3
SF1-202ENST00000334944 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 GPR139Q6DWJ6 353 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 TCTN3Q6NUS6 607 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 PTCHD4Q6ZW05 846 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 STPG2Q8N412 459 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 BMPERQ8N8U9 685 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 PDXPQ96GD0 296 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 CAMK1GQ96NX5 476 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 PBX4Q9BYU1 374 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 POLR2J2Q9GZM3 115 aaKnown RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 MED28Q9H204 178 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 GLIPR2Q9H4G4 154 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 POLMQ9NP87 494 aaPredicted RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 PLEKHB1Q9UF11 243 aaPredicted RBP13.02□□□□□ -0.33
SF1-202ENST00000334944 ING4Q9UNL4 249 aa13.02□□□□□ -0.33
SF1-202ENST00000334944 CHP2O43745 196 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 ORC5O43913 435 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 LBX1P52954 281 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 SGCGQ13326 291 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 LASP1Q14847 261 aaKnown RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 OR11H7Q8NGC8 314 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 RGMAQ96B86 450 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 SGTBQ96EQ0 304 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 C16orf58Q96GQ5 468 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 SLC28A3Q9HAS3 691 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 THSD1Q9NS62 852 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 SEMA3GQ9NS98 782 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 KCMF1Q9P0J7 381 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 COPS3Q9UNS2 423 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 SLC9A8Q9Y2E8 581 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 ATG4BQ9Y4P1 393 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 KCNE3Q9Y6H6 103 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 EML2O95834 649 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 IFNA14P01570 189 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 NR2F1P10589 423 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 PRKAR1AP10644 381 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 AK4P27144 223 aaPredicted RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 RNF144AP50876 292 aaPredicted RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 REEP5Q00765 189 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 RNASE12Q5GAN4 147 aaKnown RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 IKBIPQ70UQ0 350 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 RTL10Q7L3V2 364 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
SF1-202ENST00000334944 OR52E1Q8NGJ3 308 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 MYADMQ96S97 322 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 RHBGQ9H310 441 aa13.01□□□□□ -0.33
SF1-202ENST00000334944 RGS11O94810 467 aa13□□□□□ -0.33
SF1-202ENST00000334944 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
SF1-202ENST00000334944 RRASP10301 218 aa13□□□□□ -0.33
SF1-202ENST00000334944 CERS1P27544 350 aa13□□□□□ -0.33
SF1-202ENST00000334944 AVPR1BP47901 424 aa13□□□□□ -0.33
SF1-202ENST00000334944 GBX2P52951 348 aaPredicted RBP13□□□□□ -0.33
SF1-202ENST00000334944 CLDN20P56880 219 aa13□□□□□ -0.33
SF1-202ENST00000334944 RAB14P61106 215 aa13□□□□□ -0.33
SF1-202ENST00000334944 LGALSLQ3ZCW2 172 aaPredicted RBP13□□□□□ -0.33
SF1-202ENST00000334944 DDI2Q5TDH0 399 aa13□□□□□ -0.33
SF1-202ENST00000334944 OR4C11Q6IEV9 310 aa13□□□□□ -0.33
SF1-202ENST00000334944 ATRAIDQ6UW56 229 aa13□□□□□ -0.33
SF1-202ENST00000334944 ZNF782Q6ZMW2 699 aaPredicted RBP13□□□□□ -0.33
SF1-202ENST00000334944 ZFP41Q8N8Y5 198 aa13□□□□□ -0.33
SF1-202ENST00000334944 OR4E2Q8NGC2 313 aa13□□□□□ -0.33
SF1-202ENST00000334944 CCL4L1Q8NHW4 92 aa13□□□□□ -0.33
SF1-202ENST00000334944 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
SF1-202ENST00000334944 PLCXD1Q9NUJ7 323 aa13□□□□□ -0.33
SF1-202ENST00000334944 DPP7Q9UHL4 492 aa13□□□□□ -0.33
SF1-202ENST00000334944 AUP1Q9Y679 476 aa13□□□□□ -0.33
SF1-202ENST00000334944 LRIT2A6NDA9 550 aa13□□□□□ -0.33
SF1-202ENST00000334944 CSO75390 466 aaKnown RBP13□□□□□ -0.33
SF1-202ENST00000334944 RPN2P04844 631 aa13□□□□□ -0.33
SF1-202ENST00000334944 HBQ1P09105 142 aa13□□□□□ -0.33
SF1-202ENST00000334944 RHCEP18577 417 aa13□□□□□ -0.33
SF1-202ENST00000334944 PCBP4P57723 403 aaKnown RBP13□□□□□ -0.33
SF1-202ENST00000334944 CSNK2BP67870 215 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms