RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IL17RCQ8NAC3 791 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR52E2Q8NGJ4 325 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 UHRF2Q96PU4 802 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 TTLL2Q9BWV7 592 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 RBCK1Q9BYM8 510 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSX2Q9BZM3 304 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 CHODLQ9H9P2 273 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 DMRT1Q9Y5R6 373 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 KNG1P01042 644 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 RAF1P04049 648 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 DRD2P14416 443 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CCNB1P14635 433 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MMP11P24347 488 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MPSTP25325 297 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CCR7P32248 378 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TAS2R40P59535 323 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TAS2R46P59540 309 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SRSF9Q13242 221 aaKnown RBP eCLIP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 BAATQ14032 418 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNJ8Q15842 424 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 UGCGQ16739 394 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 IQCCQ4KMZ1 466 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PLAC9Q5JTB6 97 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 THSD4Q6ZMP0 1018 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 HSD17B13Q7Z5P4 300 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 NPAS3Q8IXF0 933 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 KLHDC8BQ8IXV7 354 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR51F2Q8NH61 342 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAMTS17Q8TE56 1095 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC35C1Q96A29 364 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PABPC5Q96DU9 382 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SENP8Q96LD8 212 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC22A12Q96S37 553 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MVB12BQ9H7P6 319 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OPN4Q9UHM6 478 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TUBE1Q9UJT0 475 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CCDC187A0A096LP49 1063 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A1B0GTH6 734 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TAAR5O14804 337 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR4E1P0C645 316 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CTSSP25774 331 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCNN1GP51170 649 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SP140Q13342 867 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MRNIPQ6NTE8 343 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 C6orf89Q6UWU4 347 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SPRED1Q7Z699 444 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR56A3Q8NH54 315 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CTDSP1Q9GZU7 261 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 RAB1BQ9H0U4 201 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 EPHA6Q9UF33 1036 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PCDHB14Q9Y5E9 798 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ANKRD36A6QL64 1941 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GAGE10A6NGK3 116 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 HDAC3O15379 428 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASGR1P07306 291 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CNR1P21554 472 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CX3CR1P49238 355 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 BAXQ07812 192 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SIM2Q14190 667 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM71F2Q6NXP2 309 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM183AQ8IXX5 376 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 RBMXL3Q8N7X1 1067 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PAFAH2Q99487 392 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAP1LC3B2A6NCE7 125 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GHRHP01286 108 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR10J1P30954 320 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 CSKP41240 450 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PTENP60484 403 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 TUSC3Q13454 348 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASAH1Q13510 395 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 VASNQ6EMK4 673 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR153Q6NV75 609 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 DHRS13Q6UX07 377 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 USP50Q70EL3 339 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 NDUFAF7Q7L592 441 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACBD7Q8N6N7 88 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF610Q8N9Z0 462 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZFP28Q8NHY6 868 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 THAP3Q8WTV1 239 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ISG20Q96AZ6 181 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAP1LC3BQ9GZQ8 125 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCML1Q9UN30 329 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 POLEQ07864 2286 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 EDDM13A0A1B0GTR0 161 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SUV39H1O43463 412 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ETHE1O95571 254 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 PNMTP11086 282 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCNN1AP37088 669 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 STK19P49842 368 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MMP21Q8N119 569 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 GREM2Q9H772 168 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZDHHC2Q9UIJ5 367 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 FEZF1A0PJY2 475 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF98A6NK75 572 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 SDR42E2A6NKP2 422 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 FOXO6A8MYZ6 492 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MED6O75586 246 aa5.77□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAGP20916 626 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms