RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CDONQ4KMG0 1287 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 FAM46CQ5VWP2 391 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 OR4C11Q6IEV9 310 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 LUZP2Q86TE4 346 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 DACT3Q96B18 629 aaPredicted RBP22.08■■□□□ 1.13
TSKU-201ENST00000333090 COQ3Q9NZJ6 369 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 CLEC4AQ9UMR7 237 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 TEX13CA0A0J9YWL9 993 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 C17orf113A0A1B0GUU1 675 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 CIB4A0PJX0 185 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 PIP5K1CO60331 668 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 RFX3P48380 749 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 DEFB115Q30KQ5 88 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 BMPERQ8N8U9 685 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 BABAM2Q9NXR7 383 aa22.08■■□□□ 1.12
TSKU-201ENST00000333090 LCMT2O60294 686 aaKnown RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 PAPLNO95428 1278 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 TPOP07202 933 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 FPR3P25089 353 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 ANXA11P50995 505 aaKnown RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 SFXN4Q6P4A7 337 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 ARL9Q6T311 187 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 LYPD4Q6UWN0 246 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 OR2T33Q8NG76 320 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 ALG8Q9BVK2 526 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 DPCDQ9BVM2 203 aaPredicted RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 TRMT61BQ9BVS5 477 aaKnown RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 TCRBP04435 133 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 SSTR2P30874 369 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 THBS2P35442 1172 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 STAT5AP42229 794 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 RNF144AP50876 292 aaPredicted RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 REEP5Q00765 189 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 PLBD1Q6P4A8 553 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 ZNF793Q6ZN11 406 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 ZNF620Q6ZNG0 422 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 PLEKHM3Q6ZWE6 761 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 CXXC5Q7LFL8 322 aaKnown RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 ACBD7Q8N6N7 88 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 C7orf57Q8NEG2 295 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 MARVELD3Q96A59 401 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 SAMD8Q96LT4 415 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 MACROD1Q9BQ69 325 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 HEXA-AS1Q9H8Q6 139 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 MED20Q9H944 212 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 KLHL1Q9NR64 748 aa22.07■■□□□ 1.12
TSKU-201ENST00000333090 TCF20Q9UGU0 1960 aaKnown RBP22.07■■□□□ 1.12
TSKU-201ENST00000333090 SPINT1O43278 529 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 ZNF250P15622 560 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 TBXA2RP21731 343 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 GALP22466 123 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 GCGRP47871 477 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 RPA4Q13156 261 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 TMEM255BQ8WV15 326 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 ACOT11Q8WXI4 607 aaPredicted RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 ZNF764Q96H86 408 aaPredicted RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 ZNF514Q96K75 400 aaPredicted RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 LINC00615Q96LM1 132 aaPredicted RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 WASH6PQ9NQA3 447 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 MARK1Q9P0L2 795 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 NUP50Q9UKX7 468 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 PRELID1Q9Y255 219 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 HEATR5BQ9P2D3 2071 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 A0A1W2PS29 197 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 C8AP07357 584 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 CD3GP09693 182 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 NPR2P20594 1047 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 GIFP27352 417 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 CDC73Q6P1J9 531 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 GJD3Q8N144 294 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 TRMT10AQ8TBZ6 339 aaKnown RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 SMAD5Q99717 465 aaKnown RBP22.06■■□□□ 1.12
TSKU-201ENST00000333090 SLC38A1Q9H2H9 487 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 MED17Q9NVC6 651 aa22.06■■□□□ 1.12
TSKU-201ENST00000333090 A0A0A6YYD5 115 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 TEX51A0A1B0GUA7 166 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 PGRMC2O15173 223 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 ZNF81P51508 661 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 RGS8P57771 180 aaPredicted RBP22.05■■□□□ 1.12
TSKU-201ENST00000333090 DUSP2Q05923 314 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 TGM3Q08188 693 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 BHLHB9Q6PI77 547 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 ADGRD2Q7Z7M1 963 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 BPHLQ86WA6 291 aaPredicted RBP22.05■■□□□ 1.12
TSKU-201ENST00000333090 FAM20CQ8IXL6 584 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 FBXL6Q8N531 539 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 TMEM99Q8N816 258 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 BEST4Q8NFU0 473 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 EVA1BQ9NVM1 165 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 MRPS7Q9Y2R9 242 aaKnown RBP22.05■■□□□ 1.12
TSKU-201ENST00000333090 CHST2Q9Y4C5 530 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 SYT5O00445 386 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 MAN2B1O00754 1011 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 CCL16O15467 120 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 CXCL10P02778 98 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 C6P13671 934 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 DRD2P14416 443 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 STXBP1P61764 594 aaKnown RBP22.05■■□□□ 1.12
TSKU-201ENST00000333090 CD276Q5ZPR3 534 aa22.05■■□□□ 1.12
TSKU-201ENST00000333090 TOMM5Q8N4H5 51 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms