RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 HORMAD2Q8N7B1 307 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 ASZ1Q8WWH4 475 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 SLC12A9Q9BXP2 914 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 TINAGL1Q9GZM7 467 aaPredicted RBP17.09■□□□□ 0.33
SOCS3-201ENST00000330871 SMG9Q9H0W8 520 aaKnown RBP17.09■□□□□ 0.33
SOCS3-201ENST00000330871 FXYD6-FXYD2A0A087WZ82 144 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 SPAM1P38567 509 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 RAG2P55895 527 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 DHODHQ02127 395 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 MLLT1Q03111 559 aaPredicted RBP17.09■□□□□ 0.33
SOCS3-201ENST00000330871 HECTD3Q5T447 861 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 MMP21Q8N119 569 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 BBS1Q8NFJ9 593 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 SLC38A5Q8WUX1 472 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 TBX5Q99593 518 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 TM6SF2Q9BZW4 377 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 DNTTIP1Q9H147 329 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 NPDC1Q9NQX5 325 aaPredicted RBP17.09■□□□□ 0.33
SOCS3-201ENST00000330871 KLHL42Q9P2K6 505 aa17.09■□□□□ 0.33
SOCS3-201ENST00000330871 COCHO43405 550 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 NTN1O95631 604 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 SNRPBP14678 240 aaKnown RBP17.08■□□□□ 0.33
SOCS3-201ENST00000330871 TBXA2RP21731 343 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 HNF1BP35680 557 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 MAPK9P45984 424 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 FNTBP49356 437 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 SMARCD3Q6STE5 483 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 ZNF783Q6ZMS7 281 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 OLIG3Q7RTU3 272 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 COMTD1Q86VU5 262 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 GANCQ8TET4 914 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 MED8Q96G25 268 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 TMEM19Q96HH6 336 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 FAIM2Q9BWQ8 316 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 BHLHE41Q9C0J9 482 aaPredicted RBP17.08■□□□□ 0.33
SOCS3-201ENST00000330871 ACTR6Q9GZN1 396 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 MTG2Q9H4K7 406 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 REEP4Q9H6H4 257 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 ASB6Q9NWX5 421 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 BABAM2Q9NXR7 383 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 NFKBIL1Q9UBC1 381 aaPredicted RBP17.08■□□□□ 0.33
SOCS3-201ENST00000330871 NDRG3Q9UGV2 375 aa17.08■□□□□ 0.33
SOCS3-201ENST00000330871 VWA8A3KMH1 1905 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 GALR3O60755 368 aaPredicted RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 TIA1P31483 386 aaKnown RBP eCLIP17.08■□□□□ 0.325e-6■■□□□ 14.2
SOCS3-201ENST00000330871 SEC61A1P61619 476 aaKnown RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 RPS13P62277 151 aaKnown RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 LGALS3BPQ08380 585 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 KLF9Q13886 244 aaPredicted RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 FAM74A1Q5RGS3 127 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 ELP2Q6IA86 826 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 GSG1LQ6UXU4 331 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 ZNF704Q6ZNC4 412 aaPredicted RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 SYT9Q86SS6 491 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 TMEM151BQ8IW70 566 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 ZFP82Q8N141 532 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 KRT78Q8N1N4 520 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 MEIOBQ8N635 442 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 BPIFCQ8NFQ6 507 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 GOT1L1Q8NHS2 421 aaPredicted RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 CMSS1Q9BQ75 279 aaKnown RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 ADAT1Q9BUB4 502 aaKnown RBP17.08■□□□□ 0.32
SOCS3-201ENST00000330871 RCE1Q9Y256 329 aa17.08■□□□□ 0.32
SOCS3-201ENST00000330871 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 HPP00738 406 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 RLN2P04090 185 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 C8GP07360 202 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 MST1P26927 711 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 KCNJ3P48549 501 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 FZD5Q13467 585 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 CDKN3Q16667 212 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 HTR3DQ70Z44 454 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 PRICKLE2Q7Z3G6 844 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 CCDC36Q8IYA8 594 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 CBARPQ8N350 705 aaPredicted RBP17.07■□□□□ 0.32
SOCS3-201ENST00000330871 PPCDCQ96CD2 204 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 ZNF649Q9BS31 505 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 BCL2L14Q9BZR8 327 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 SLC22A11Q9NSA0 550 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 IRGMA1A4Y4 181 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 ZNF840PA6NDX5 716 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 OR2W5A6NFC9 320 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 CHST10O43529 356 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 FABP1P07148 127 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 GDNFP39905 211 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 ZNF660Q6AZW8 331 aaPredicted RBP17.07■□□□□ 0.32
SOCS3-201ENST00000330871 FAAP20Q6NZ36 180 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 SLC16A13Q7RTY0 426 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 CBLN2Q8IUK8 224 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 EIF4E3Q8N5X7 224 aaKnown RBP17.07■□□□□ 0.32
SOCS3-201ENST00000330871 FCRL4Q96PJ5 515 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 A4GNTQ9UNA3 340 aa17.07■□□□□ 0.32
SOCS3-201ENST00000330871 FAM25EA8MYX2 175 aa17.06■□□□□ 0.32
SOCS3-201ENST00000330871 LRRN3E7EW58 273 aa17.06■□□□□ 0.32
SOCS3-201ENST00000330871 GPR31O00270 319 aa17.06■□□□□ 0.32
SOCS3-201ENST00000330871 SGCEO43556 437 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms