RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ST3GAL5Q9UNP4 418 aa7.88□□□□□ -1.15
SKA2-201ENST00000330137 ERVK-19Q9WJR5 959 aa7.88□□□□□ -1.15
SKA2-201ENST00000330137 CHD5Q8TDI0 1954 aa7.88□□□□□ -1.15
SKA2-201ENST00000330137 TDRD15B5MCY1 1934 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 KIAA1671Q9BY89 1806 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TO15178 435 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 GPR37L1O60883 481 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 GP1BAP07359 652 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PIRTP0C851 137 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 MPC1LP0DKB6 136 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZNF3P17036 446 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 POU3F2P20265 443 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 HNF1BP35680 557 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 FEN1P39748 380 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 MAPK9P45984 424 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 CCR6P51684 374 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TBX4P57082 545 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 DSC1Q08554 894 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PDE7AQ13946 482 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZSWIM7Q19AV6 140 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TCTN3Q6NUS6 607 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 FUT10Q6P4F1 479 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZNF322Q6U7Q0 402 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 USP53Q70EK8 1073 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 CXXC5Q7LFL8 322 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 TMPRSS9Q7Z410 1059 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 RAD51AP1Q96B01 352 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZDHHC12Q96GR4 267 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 WRAP53Q9BUR4 548 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 BCL2L14Q9BZR8 327 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 EGLN1Q9GZT9 426 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 REEP4Q9H6H4 257 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TMEM161AQ9NX61 479 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 STOX2Q9P2F5 926 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 RASD1Q9Y272 281 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZNF106Q9H2Y7 1883 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 PTPRDP23468 1912 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PLXNA3P51805 1871 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 DNAJC25-GNG10A0A024R161 153 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 UBE2QL1A1L167 161 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 SMIM30A4D0T7 59 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 C2orf78A6NCI8 922 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 MANSC4A6NHS7 340 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 OR6C75A6NL08 312 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 GABARAPH6UMI1 98 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PLPP2O43688 288 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 NME6O75414 186 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 SLC25A14O95258 325 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 SYPP08247 313 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 AOAHP28039 575 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PMELP40967 661 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 PREPP48147 710 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 CXADRP78310 365 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 SNTB1Q13884 538 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 SPDYE7PQ495Y7 208 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 MARCH8Q5T0T0 291 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 TAPT1Q6NXT6 567 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 FAM83HQ6ZRV2 1179 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 Q6ZTK2 550 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 BEND4Q6ZU67 534 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 SCD5Q86SK9 330 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 CIR1Q86X95 450 aaPredicted RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 METTL23Q86XA0 190 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 GJD3Q8N144 294 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 HORMAD2Q8N7B1 307 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 NANPQ8TBE9 248 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 THEM6Q8WUY1 208 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 ZDHHC5Q9C0B5 715 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 SPATC1LQ9H0A9 340 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 RERGLQ9H628 205 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 MRTO4Q9UKD2 239 aaKnown RBP7.87□□□□□ -1.15
SKA2-201ENST00000330137 FBXW2Q9UKT8 454 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 SCML2Q9UQR0 700 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 DMRT1Q9Y5R6 373 aa7.87□□□□□ -1.15
SKA2-201ENST00000330137 DENND4AQ7Z401 1863 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 A0A0G2JK05 382 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 SMIM35A0A1B0GVV1 85 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 MGAT4DA6NG13 374 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 C5orf52A6NGY3 159 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 GFYI3L273 518 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 J3QRE1 110 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 SCAMP1O15126 338 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 EIF4E2O60573 245 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 SOX14O95416 240 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 HTR1FP30939 366 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 NRG3P56975 720 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 STARD6P59095 220 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 DUSP4Q13115 394 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 MADCAM1Q13477 382 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 COX20Q5RI15 118 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 SFRP5Q5T4F7 317 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 LRRN1Q6UXK5 716 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 NUDT18Q6ZVK8 323 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 LHFPL3Q86UP9 236 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 NR2C2APQ86WQ0 139 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms