RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 COX18Q8N8Q8 333 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 DYNC2LI1Q8TCX1 351 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 HOXB13Q92826 284 aaPredicted RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 UBE2FQ969M7 185 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 ZNF350Q9GZX5 532 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 FBXO8Q9NRD0 319 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 WDFY4Q6ZS81 3184 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 A0A0C4DFX4 3053 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 GXYLT2A0PJZ3 443 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 ARHGAP33O14559 1287 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 COQ9O75208 318 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 H1F0P07305 194 aaKnown RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 PSMB9P28065 219 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 EMDP50402 254 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 VBP1P61758 197 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 ZNF267Q14586 743 aaPredicted RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 GPR68Q15743 365 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 SLC23A3Q6PIS1 610 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 ENTHD1Q8IYW4 607 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 ARHGDIGQ99819 225 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 MROQ9BYG7 248 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 GMEB2Q9UKD1 530 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 SATB2Q9UPW6 733 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 PMF1-BGLAPU3KQ54 211 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 DMDP11532 3685 aa18.83■□□□□ 0.61
RIPPLY3-201ENST00000329553 AGRPO00253 132 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 FRS3O43559 492 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 ELAVL4P26378 380 aaKnown RBP18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 PRKAR1BP31321 381 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 CSNK2BP67870 215 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZNF155Q12901 538 aaPredicted RBP18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 OXA1LQ15070 435 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 SEC23BQ15437 767 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZNF770Q6IQ21 691 aaPredicted RBP18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 RCBTB1Q8NDN9 531 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 PSD2Q9BQI7 771 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 PRR14Q9BWN1 585 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 LRRN3Q9H3W5 708 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 RASSF1Q9NS23 344 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 ADAMTS20P59510 1910 aa18.83■□□□□ 0.6
RIPPLY3-201ENST00000329553 CENPVL1A0A0U1RR11 272 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 CLDN24A6NM45 220 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 KPNA4O00629 521 aaPredicted RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 STX11O75558 287 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 NKX2-2O95096 273 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 GASTP01350 101 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 SP9P0CG40 484 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 POU2F1P14859 743 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 CBLP22681 906 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 PSG6Q00889 435 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 DGCR6Q14129 220 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 FIGNL1Q6PIW4 674 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZC3H14Q6PJT7 736 aaKnown RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 RABEPKQ7Z6M1 372 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 PEX5LQ8IYB4 626 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 MFSD4AQ8N468 514 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZBTB44Q8NCP5 570 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 PTCHD1Q96NR3 888 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 DPYSL5Q9BPU6 564 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 SAP130Q9H0E3 1048 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 FOLH1BQ9HBA9 442 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 SLC13A4Q9UKG4 626 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZNF443Q9Y2A4 671 aaPredicted RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 IFT52Q9Y366 437 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 FRYLO94915 3013 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 TPST2O60704 377 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 NADKO95544 446 aaPredicted RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 CER1O95813 267 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 IFNA16P05015 189 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 TGFBR2P37173 567 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 PGDP52209 483 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 LSM3P62310 102 aaKnown RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 MAPK14Q16539 360 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 DCST1Q5T197 706 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 C1orf189Q5VU69 101 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 UBE2UQ5VVX9 321 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 AQP11Q8NBQ7 271 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 OR6Q1Q8NGQ2 317 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 GTPBP3Q969Y2 492 aaKnown RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 RNF31Q96EP0 1072 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 NEURL2Q9BR09 285 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 CNPPD1Q9BV87 410 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 GTPBP2Q9BX10 602 aaKnown RBP18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 SMOC1Q9H4F8 434 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZNF304Q9HCX3 659 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 CTPS2Q9NRF8 586 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 SELENONQ9NZV5 590 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 TMCC3Q9ULS5 477 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 POFUT2Q9Y2G5 429 aa18.82■□□□□ 0.6
RIPPLY3-201ENST00000329553 AGAP5A6NIR3 686 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 DSCR3O14972 297 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 SERPINB10P48595 397 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 POU6F2P78424 691 aaPredicted RBP18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 SERTAD2Q14140 314 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 Q6ZPB1 254 aaPredicted RBP18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 MED25Q71SY5 747 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 ZNF619Q8N2I2 560 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 OR4D9Q8NGE8 314 aa18.81■□□□□ 0.6
RIPPLY3-201ENST00000329553 SLC7A13Q8TCU3 470 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms