RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ACSM1Q08AH1 577 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 SELENBP1Q13228 472 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 CD200R1LQ6Q8B3 271 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 C11orf74Q86VG3 221 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 RNF113BQ8IZP6 322 aaKnown RBP20.83■□□□□ 0.92
PNKP-201ENST00000322344 CDRT4Q8N9R6 151 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 ZNF485Q8NCK3 441 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 AP3S1Q92572 193 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 PMM1Q92871 262 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 TMEM203Q969S6 136 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 STACQ99469 402 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 JAM3Q9BX67 310 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 MIR1-1HGQ9H1L0 117 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 C14orf119Q9NWQ9 140 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 C2orf74A8MZ97 194 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 PIP5K1CO60331 668 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 PLOD3O60568 738 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 MSL3P1P0C860 447 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 DRD1P21728 446 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 ACSL1P33121 698 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 MXD1Q05195 221 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 ILF3Q12906 894 aaKnown RBP eCLIP20.82■□□□□ 0.92
PNKP-201ENST00000322344 HNRNPA0Q13151 305 aaKnown RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 CRTC2Q53ET0 693 aaPredicted RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 DCST2Q5T1A1 773 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 PSD4Q8NDX1 1056 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 BRIX1Q8TDN6 353 aaKnown RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 TPK1Q9H3S4 243 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 H2AFY2Q9P0M6 372 aaPredicted RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 PCDHGB2Q9Y5G2 931 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 LOC105369274A0A096LPK9 316 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 LOC102723532A0A0G2JNH3 316 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 TRDV1A0A1B0GX56 115 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 H0YGG7 62 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 CH25HO95992 272 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 IGHA1P01876 353 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 GAAP10253 952 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 SOX18P35713 384 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 ARF3P61204 181 aaPredicted RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 GPR68Q15743 365 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 TRMT12Q53H54 448 aaKnown RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 OR4N4Q8N0Y3 316 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 KLHL36Q8N4N3 616 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 OR52N1Q8NH53 320 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 BAHD1Q8TBE0 780 aaPredicted RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 SRRQ9GZT4 340 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 MCOLN1Q9GZU1 580 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 POT1Q9NUX5 634 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 PLEKHB1Q9UF11 243 aaPredicted RBP20.82■□□□□ 0.92
PNKP-201ENST00000322344 MSRAQ9UJ68 235 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 CLCA2Q9UQC9 943 aa20.82■□□□□ 0.92
PNKP-201ENST00000322344 H3BQ06 376 aaPredicted RBP20.81■□□□□ 0.92
PNKP-201ENST00000322344 RFXAPO00287 272 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 FMO6PO60774 539 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 DNAJB6O75190 326 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 HTR4Q13639 388 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 GID4Q8IVV7 300 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 GALNT12Q8IXK2 581 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 EVA1AQ9H8M9 152 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 IL21RQ9HBE5 538 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 ADAP2Q9NPF8 381 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 NPAP1Q9NZP6 1156 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 CLEC1BQ9P126 229 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 TBC1D24Q9ULP9 559 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 GRIP1Q9Y3R0 1128 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 HS3ST3A1Q9Y663 406 aa20.81■□□□□ 0.92
PNKP-201ENST00000322344 LAMA3Q16787 3333 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 UNC119BA6NIH7 251 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 AKAP8O43823 692 aaKnown RBP20.8■□□□□ 0.92
PNKP-201ENST00000322344 GPR75O95800 540 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 NID1P14543 1247 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 SDC2P34741 201 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 ZNF79Q15937 498 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 RNF44Q7L0R7 432 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 SHFQ7M4L6 423 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 COX18Q8N8Q8 333 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 SIMC1Q8NDZ2 872 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 SAMD8Q96LT4 415 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 PRSS27Q9BQR3 290 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 TOR4AQ9NXH8 423 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 NT5EP21589 574 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 GCGRP47871 477 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 ADAM15Q13444 863 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 CCNJQ5T5M9 372 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 DDI2Q5TDH0 399 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 XKRXQ6PP77 449 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 LHFPL3Q86UP9 236 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 FAM3CQ92520 227 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 EFHD2Q96C19 240 aaPredicted RBP20.8■□□□□ 0.92
PNKP-201ENST00000322344 FN3KQ9H479 309 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 ABCB9Q9NP78 766 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 MUTYHQ9UIF7 546 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 ZNF223Q9UK11 482 aaPredicted RBP20.8■□□□□ 0.92
PNKP-201ENST00000322344 FBXL21Q9UKT6 434 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 CBLCQ9ULV8 474 aa20.8■□□□□ 0.92
PNKP-201ENST00000322344 YARS2Q9Y2Z4 477 aaKnown RBP20.8■□□□□ 0.92
PNKP-201ENST00000322344 A0A0J9YY10 115 aa20.79■□□□□ 0.92
PNKP-201ENST00000322344 ZNF860A6NHJ4 632 aa20.79■□□□□ 0.92
PNKP-201ENST00000322344 DYRK3O43781 588 aa20.79■□□□□ 0.92
PNKP-201ENST00000322344 CLEC2LP0C7M8 214 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms