RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 YIPF1Q9Y548 306 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 PIP5K1CO60331 668 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 LPLP06858 475 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 GIFP27352 417 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 PRKAR1BP31321 381 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 OR4D2P58180 307 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 UNC50Q53HI1 259 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 OR9A4Q8NGU2 314 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 RBMXL1Q96E39 390 aaKnown RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 INPP5EQ9NRR6 644 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 KCNK6Q9Y257 313 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 C20orf202A1L168 122 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 E7ESA3 106 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 GAPDHSO14556 408 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 DVL2O14641 736 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 DLX5P56178 289 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 OR4M1Q8NGD0 313 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 CFHP08603 1231 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 SERPINF1P36955 418 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 MAGEB1P43366 347 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TAP2Q03519 686 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF791Q3KP31 576 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 OR5D14Q8NGL3 314 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ZFAND1Q8TCF1 268 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TXNDC15Q96J42 360 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 UHRF1Q96T88 793 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TCEAL2Q9H3H9 227 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 CA5BQ9Y2D0 317 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TSPAN6O43657 245 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 MED6O75586 246 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ETV6P41212 452 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 NPY6RQ99463 290 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 A0A0G2JLL6 359 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ADAM10O14672 748 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 SRPX2O60687 465 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 STK17BO94768 372 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 DAP3P51398 398 aaKnown RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 SNU13P55769 128 aaKnown RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TAS2R19P59542 299 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 SMIM15Q7Z3B0 74 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 PRRT2Q7Z6L0 340 aaPredicted RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF546Q86UE3 836 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 METTL2AQ96IZ6 378 aaKnown RBP15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 LRIG1Q96JA1 1093 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 ST6GALNAC5Q9BVH7 336 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 PPP1R14DQ9NXH3 145 aa15.99■□□□□ 0.15
SMCHD1-201ENST00000320876 TYRP1P17643 537 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 TAS2R30P59541 319 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 METTL27Q8N6F8 245 aaPredicted RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 IL17RDQ8NFM7 739 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 BRIX1Q8TDN6 353 aaKnown RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 GPR148Q8TDV2 347 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 RAB7BQ96AH8 199 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 DAZAP1Q96EP5 407 aaKnown RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 PTCHD1Q96NR3 888 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MYADMQ96S97 322 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 RNF144AP50876 292 aaPredicted RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 CLVS2Q5SYC1 327 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 UEVLDQ8IX04 471 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 PCDHGA7Q9Y5G6 932 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 GPR137BO60478 399 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 SNRNP70P08621 437 aaKnown RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 GDI1P31150 447 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 ETV3P41162 512 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 DLX2Q07687 328 aaPredicted RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MRGPRX2Q96LB1 330 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 POU2F3Q9UKI9 436 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 HNF1BP35680 557 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 CDKN2DP55273 166 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MZT1Q08AG7 82 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MPP7Q5T2T1 576 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 STEAP4Q687X5 459 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 ECHDC3Q96DC8 303 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 SDSLQ96GA7 329 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 STRADBQ9C0K7 418 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 OR1A2Q9Y585 309 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 MMP12P39900 470 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 FAM212BQ9NTI7 297 aaPredicted RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 ASXL3Q9C0F0 2248 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 KIAA0319Q5VV43 1072 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 NXPE4Q6UWF7 544 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 SERINC5Q86VE9 423 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 NRMQ8IXM6 262 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 LMX1AQ8TE12 382 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 EGFP01133 1207 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 UBL4AP11441 157 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 PPP3CBP16298 524 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 HIST2H3PS2Q5TEC6 136 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 CRTC1Q6UUV9 634 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 OR5D16Q8NGK9 328 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 TOMM40LQ969M1 308 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 HRH4Q9H3N8 390 aa15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 TXNL4BQ9NX01 149 aaKnown RBP15.98■□□□□ 0.15
SMCHD1-201ENST00000320876 ONECUT3O60422 494 aaPredicted RBP15.97■□□□□ 0.15
SMCHD1-201ENST00000320876 APBB3O95704 486 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms