RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RHOXF1Q8NHV9 184 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 GTPBP2Q9BX10 602 aaKnown RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 PNO1Q9NRX1 252 aaKnown RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 PLCXD1Q9NUJ7 323 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 TESQ9UGI8 421 aaKnown RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 DTX4Q9Y2E6 619 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 CLCA3PQ9Y6N3 262 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 CENPVL1A0A0U1RR11 272 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 D6RAR5 112 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 PEX12O00623 359 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 DDAH2O95865 285 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 FGF5P12034 268 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 CHMP24386 653 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ATP12AP54707 1039 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 PSPHP78330 225 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ZFP36L1Q07352 338 aaKnown RBP16.52■□□□□ 0.23
RAB39A-201ENST00000320578 IL11RAQ14626 422 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 PLEKHM3Q6ZWE6 761 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ZER1Q7Z7L7 766 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ENTHD1Q8IYW4 607 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ACOT11Q8WXI4 607 aaPredicted RBP16.52■□□□□ 0.23
RAB39A-201ENST00000320578 TSLPQ969D9 159 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 TUBA1CQ9BQE3 449 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 ITPAQ9BY32 194 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 SLC7A5P2Q9GIP4 190 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 VN1R1Q9GZP7 353 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 HOXD1Q9GZZ0 328 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 DUSP21Q9H596 190 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 SLC22A11Q9NSA0 550 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 SEMA4GQ9NTN9 838 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 SCN3BQ9NY72 215 aa16.52■□□□□ 0.23
RAB39A-201ENST00000320578 SCN2AQ99250 2005 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 A0A087WUU8 490 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 POLR1CO15160 346 aaPredicted RBP16.51■□□□□ 0.23
RAB39A-201ENST00000320578 IGKV1D-16P01601 117 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 AGXTP21549 392 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 ACP1P24666 158 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 TARDBPQ13148 414 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAB39A-201ENST00000320578 PTGES3Q15185 160 aaKnown RBP16.51■□□□□ 0.23
RAB39A-201ENST00000320578 VWA2Q5GFL6 755 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 PLA2G2CQ5R387 149 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 C1orf189Q5VU69 101 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 B3GNT8Q7Z7M8 397 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 ZSCAN1Q8NBB4 408 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 CNIH3Q8TBE1 160 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 GNPDA2Q8TDQ7 276 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 ZNF721Q8TF20 911 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 SLC41A3Q96GZ6 507 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 RBM38Q9H0Z9 239 aaKnown RBP16.51■□□□□ 0.23
RAB39A-201ENST00000320578 CCNB1IP1Q9NPC3 277 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 RNF6Q9Y252 685 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 PCDHGB1Q9Y5G3 927 aa16.51■□□□□ 0.23
RAB39A-201ENST00000320578 TRAPPC13A5PLN9 417 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 CLDN24A6NM45 220 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 OR6C76A6NM76 312 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 CPSF4LA6NMK7 179 aaKnown RBP16.5■□□□□ 0.23
RAB39A-201ENST00000320578 FRS3O43559 492 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 SCRG1O75711 98 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 POU2F1P14859 743 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 MMP11P24347 488 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 EEF1B2P24534 225 aaKnown RBP16.5■□□□□ 0.23
RAB39A-201ENST00000320578 CDC42P60953 191 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 FGFBP1Q14512 234 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 NSDHLQ15738 373 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 MFSD4BQ5TF39 518 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 ZNF385CQ66K41 422 aaPredicted RBP16.5■□□□□ 0.23
RAB39A-201ENST00000320578 GDF7Q7Z4P5 450 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 ZAR1Q86SH2 424 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 PPP1R3BQ86XI6 285 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 BCORP1Q8N888 145 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 OR4N2Q8NGD1 307 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 SLC2A12Q8TD20 617 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 IPCEF1Q8WWN9 437 aaPredicted RBP16.5■□□□□ 0.23
RAB39A-201ENST00000320578 ZNF559Q9BR84 538 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 VCX3AQ9NNX9 186 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 MRTO4Q9UKD2 239 aaKnown RBP16.5■□□□□ 0.23
RAB39A-201ENST00000320578 NUP210LQ5VU65 1888 aa16.5■□□□□ 0.23
RAB39A-201ENST00000320578 FRG2CA6NGY1 282 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 WBP4O75554 376 aaKnown RBP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 GABRB1P18505 474 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 DCDP81605 110 aaKnown RBP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 OCA2Q04671 838 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 ZBED5Q49AG3 693 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 SLX4IPQ5VYV7 408 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 PWWP2BQ6NUJ5 590 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 ZNF613Q6PF04 617 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 RNF113BQ8IZP6 322 aaKnown RBP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 FAM81AQ8TBF8 368 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 TRUB1Q8WWH5 349 aaKnown RBP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 MKL2Q9ULH7 1088 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 OR10H1Q9Y4A9 318 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 NINQ8N4C6 2090 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 TO15178 435 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 FLRT2O43155 660 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 LDOC1O95751 146 aaPredicted RBP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 IL33O95760 270 aa16.49■□□□□ 0.23
RAB39A-201ENST00000320578 CSTF2P33240 577 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAB39A-201ENST00000320578 ADH7P40394 386 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms