RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KLF8O95600 359 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 TRIM23P36406 574 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 LIMS1P48059 325 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 RPS25P62851 125 aaKnown RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 MLLT1Q03111 559 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 FCN2Q15485 313 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 DCST1Q5T197 706 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF761Q86XN6 746 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 FAM46DQ8NEK8 389 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 PATE1Q8WXA2 126 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 HYLS1Q96M11 299 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 APOOQ9BUR5 198 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 HEXA-AS1Q9H8Q6 139 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 NEUROD4Q9HD90 331 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ATP6V1G2-DDX39BF2Z307 99 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 TLR4O00206 839 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 CACNB4O00305 520 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 RFPL3O75679 317 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 NCR1O76036 304 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 RASGRP1O95267 797 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ASGR2P07307 311 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 PIPP12273 146 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 MC3RP41968 323 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ACTR1BP42025 376 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ADPRHP54922 357 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 PCBP4P57723 403 aaKnown RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ACTR1AP61163 376 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF91Q05481 1191 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 RGS1Q08116 209 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 RPE65Q16518 533 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 ATAT1Q5SQI0 421 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 CLDN22Q8N7P3 220 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 DNAJC5GQ8N7S2 189 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 OR2L3Q8NG85 312 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 OR9A2Q8NGT5 310 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC7A13Q8TCU3 470 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 CNRIP1Q96F85 164 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 SENP5Q96HI0 755 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 SOSTQ9BQB4 213 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC28A3Q9HAS3 691 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 THSD1Q9NS62 852 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 MGAT4AQ9UM21 535 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 INMT-MINDY4F8WBC2 141 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TSPAN4O14817 238 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 PROM1O43490 865 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ADH1BP00325 375 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 LAMP2P13473 410 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 PEBP1P30086 187 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 NTSP30990 170 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ETV5P41161 510 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ETV1P50549 477 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 CTBP2P56545 445 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 CCDC85BQ15834 202 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 HSDL2Q6YN16 418 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 USP30Q70CQ3 517 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 MAPKAP1Q9BPZ7 522 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 WACQ9BTA9 647 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 MND1Q9BWT6 205 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TVP23BQ9NYZ1 205 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 CDH10Q9Y6N8 788 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 AIFM1O95831 613 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 HLA-DQB1P01920 261 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 H1F0P07305 194 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ERGP11308 486 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 IL18Q14116 193 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 CCNJQ5T5M9 372 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 OR2G6Q5TZ20 316 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF730Q6ZMV8 503 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TCEANCQ8N8B7 351 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 OR6C4Q8NGE1 309 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 MS4A6EQ96DS6 147 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 C1GALT1C1Q96EU7 318 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TOE1Q96GM8 510 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TSSK6Q9BXA6 273 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TMEM168Q9H0V1 697 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 CDCP1Q9H5V8 836 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ZFP64Q9NPA5 681 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF224Q9NZL3 707 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 IL20RAQ9UHF4 553 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TDRD6O60522 2096 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 A0A0A6YYJ9 748 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 GSAPA4D1B5 854 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 H3BUI4 141 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 DNAJB6O75190 326 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC43A1O75387 559 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 EGFP01133 1207 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 SDHBP21912 280 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 HIST1H1TP22492 207 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ACSL1P33121 698 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 MLLT11Q13015 90 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 NCF4Q15080 339 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TOR1AIP2Q8NFQ8 470 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 OR6T1Q8NGN1 323 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF431Q8TF32 576 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 TM9SF4Q92544 642 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 AKAP1Q92667 903 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 PHF21AQ96BD5 680 aa14.55□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF607Q96SK3 696 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms