RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PPP4R1LQ9P1A2 415 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 FBN3Q75N90 2809 aa12.81□□□□□ -0.36
RPP40-201ENST00000319533 HIVEP2P31629 2446 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 SERTM1A2A2V5 107 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 OR2M5A3KFT3 312 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 MYO1GB0I1T2 1018 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 H0YC42 278 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 C16orf97H3BN30 126 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 SLITRK5O94991 958 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 PSMG1O95456 288 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 POU2F1P14859 743 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 PAX1P15863 534 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 TIA1P31483 386 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPP40-201ENST00000319533 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
RPP40-201ENST00000319533 ZNF844Q08AG5 666 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 ACSM2AQ08AH3 577 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 TMEM44Q2T9K0 475 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 ACSM2BQ68CK6 577 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 YTHDF3Q7Z739 585 aaKnown RBP12.8□□□□□ -0.36
RPP40-201ENST00000319533 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 METTL25Q8N6Q8 603 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 BANPQ8N9N5 519 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 APIPQ96GX9 242 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 ZNF845Q96IR2 970 aaPredicted RBP12.8□□□□□ -0.36
RPP40-201ENST00000319533 Q96MF0 132 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 FAM111AQ96PZ2 611 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 KCNA7Q96RP8 456 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 CCL19Q99731 98 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 GSX2Q9BZM3 304 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 C12orf65Q9H3J6 166 aaKnown RBP12.8□□□□□ -0.36
RPP40-201ENST00000319533 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 SDHAF3Q9NRP4 125 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 GIMAP4Q9NUV9 329 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 TAS2R7Q9NYW3 318 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 OR10H1Q9Y4A9 318 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 TIMM22Q9Y584 194 aa12.8□□□□□ -0.36
RPP40-201ENST00000319533 ANK3Q12955 4377 aaKnown RBP12.8□□□□□ -0.36
RPP40-201ENST00000319533 DSCAMO60469 2012 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 IGLV3-32A0A0A0MS00 114 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 GNG14A0A1W2PPG7 69 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 TRIM13O60858 407 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 COQ9O75208 318 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 HK1P19367 917 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
RPP40-201ENST00000319533 HTR6P50406 440 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 CLDN20P56880 219 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 IMPG1Q17R60 797 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 PRSS53Q2L4Q9 553 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 RAET1LQ5VY80 246 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 C10orf107Q8IVU9 208 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 ZNF610Q8N9Z0 462 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.79□□□□□ -0.36
RPP40-201ENST00000319533 FNDC9Q8TBE3 224 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 C1GALT1C1Q96EU7 318 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 TMEM109Q9BVC6 243 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 UBTD1Q9HAC8 227 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
RPP40-201ENST00000319533 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 MED11Q9P086 117 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 SENP1Q9P0U3 644 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 C19orf53Q9UNZ5 99 aaPredicted RBP12.79□□□□□ -0.36
RPP40-201ENST00000319533 ROS1P08922 2347 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 PCNX3Q9H6A9 2034 aa12.79□□□□□ -0.36
RPP40-201ENST00000319533 UBFD1O14562 309 aaKnown RBP12.78□□□□□ -0.36
RPP40-201ENST00000319533 SCO2O43819 266 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 TMCC2O75069 709 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 SPAG7O75391 227 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 IL33O95760 270 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 IFI6P09912 130 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 DDCP20711 480 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 IL11P20809 199 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 TBXA2RP21731 343 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 SIRPAP78324 504 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PCLAFQ15004 111 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PON3Q15166 354 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 KRT71Q3SY84 523 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 ZNF550Q7Z398 422 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 OR2L13Q8N349 312 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 DUSP19Q8WTR2 217 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PIGQQ9BRB3 760 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PTGES2Q9H7Z7 377 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PLSCR4Q9NRQ2 329 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 PROCRQ9UNN8 238 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 AP4B1Q9Y6B7 739 aa12.78□□□□□ -0.36
RPP40-201ENST00000319533 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 UPK1AO00322 258 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 RGS16O15492 202 aaPredicted RBP12.77□□□□□ -0.37
RPP40-201ENST00000319533 KLF4O43474 513 aa12.77□□□□□ -0.37
RPP40-201ENST00000319533 ATP8B1O43520 1251 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms