RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KCNMB2Q9Y691 235 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 A0A0G2JPF8 293 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 HNRNPCL2B2RXH8 293 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 HNRNPCL3B7ZW38 293 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 H0Y3Z8 333 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 TSPAN2O60636 221 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 PPM1BO75688 479 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 MFN2O95140 757 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 CAPNS1P04632 268 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 UBTFL6P0CB48 400 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 HNRNPCL4P0DMR1 293 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 SPINK14Q6IE38 97 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 APOOLQ6UXV4 268 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 MDGA2Q7Z553 956 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 MARCH3Q86UD3 253 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 PEX5LQ8IYB4 626 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 C17orf47Q8NEP4 570 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 SPPL2AQ8TCT8 520 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 CANT1Q8WVQ1 401 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 SH3YL1Q96HL8 342 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 CTPS2Q9NRF8 586 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 HPF1Q9NWY4 346 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 CALML5Q9NZT1 146 aa14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 MRTO4Q9UKD2 239 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 YARS2Q9Y2Z4 477 aaKnown RBP14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 GPC6Q9Y625 555 aaPredicted RBP14.15□□□□□ -0.14
PDLIM5-202ENST00000318007 DSPPQ9NZW4 1301 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 M0R3H8 397 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TO15178 435 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SUV39H1O43463 412 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 HS6ST1O60243 411 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 OXSR1O95747 527 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 AK1P00568 194 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PABPC4LP0CB38 370 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 YAP1P46937 504 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PSMD4P55036 377 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 ACTR3P61158 418 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TRAP1Q12931 704 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 KCNAB2Q13303 367 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 FXNQ16595 210 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 MEP1AQ16819 746 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 BROXQ5VW32 411 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF836Q6ZNA1 936 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PATL1Q86TB9 770 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CLIP4Q8N3C7 705 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SPACA9Q96E40 222 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 RNF145Q96MT1 663 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PRR14Q9BWN1 585 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 GORASP2Q9H8Y8 452 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 MTHFD2LQ9H903 347 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CACYBPQ9HB71 228 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 DCAF13Q9NV06 445 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 KLRF1Q9NZS2 232 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 DKK4Q9UBT3 224 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 ZNF443Q9Y2A4 671 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PIEZO2Q9H5I5 2752 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TCRBV5S2A0A599 114 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 AGAP5A6NIR3 686 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 hCG_2039718K7EN88 272 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SCDO00767 359 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SERPINB7O75635 380 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 DIRAS1O95057 198 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 GKN3PP0CG01 181 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 EVI2BP34910 448 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CCR4P51679 360 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 GPR85P60893 370 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 INPP5JQ15735 1006 aaPredicted RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CD226Q15762 336 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SPATS1Q496A3 300 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CRB2Q5IJ48 1285 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 MRPL2Q5T653 305 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 AGAP7PQ5VUJ5 663 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 LYPD8Q6UX82 237 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 LACC1Q8IV20 430 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CYP4Z2PQ8N1L4 340 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 GPR32P1Q8NGA4 272 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 PHOSPHO1Q8TCT1 267 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 SLC39A7Q92504 469 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 EXTL1Q92935 676 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 AGAP4Q96P64 663 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TBL1XR1Q9BZK7 514 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TRIM15Q9C019 465 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 ADPRHL2Q9NX46 363 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 CSAG2Q9Y5P2 127 aa14.14□□□□□ -0.15
PDLIM5-202ENST00000318007 TMEM229AB2RXF0 380 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 PDE9AO76083 593 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 WDPCPO95876 746 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 EPPINO95925 133 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 FESP07332 822 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 CCL3P10147 92 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 TCEA1P23193 301 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 RYKP34925 604 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 MAGEA8P43361 318 aa14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 TMED10P49755 219 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 TXNL4AP83876 142 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-202ENST00000318007 CBLL1Q75N03 491 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms