RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NEURL3Q96EH8 262 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 CNRIP1Q96F85 164 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 ZC3HAV1LQ96H79 300 aaKnown RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 AMDHD1Q96NU7 426 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 MAPKAP1Q9BPZ7 522 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 IER2Q9BTL4 223 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 TMEM38AQ9H6F2 299 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 GLS2Q9UI32 602 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 FKBP7Q9Y680 259 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 PRAMEF25A6NGN4 478 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 K7ESF4 209 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 PROM1O43490 865 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 LAMTOR5O43504 91 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 RFPL3O75679 317 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 DIRAS1O95057 198 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 OPN1SWP03999 348 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 CSF2P04141 144 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 ARAFP10398 606 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 NME1P15531 152 aaKnown RBP12.21□□□□□ -0.46
CPNE1-201ENST00000317677 IGFBP5P24593 272 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 BTN3A2P78410 334 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 KCNJ10P78508 379 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 HHEXQ03014 270 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 MAB21L1Q13394 359 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 SCARB2Q14108 478 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 GPR19Q15760 415 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 BAK1Q16611 211 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 ZC3H14Q6PJT7 736 aaKnown RBP12.21□□□□□ -0.46
CPNE1-201ENST00000317677 CYP4Z2PQ8N1L4 340 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 C9orf62Q8N4C0 152 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF680Q8NEM1 530 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 CADM4Q8NFZ8 388 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 OR8H1Q8NGG4 311 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 VANGL1Q8TAA9 524 aaPredicted RBP12.21□□□□□ -0.46
CPNE1-201ENST00000317677 MYDGFQ969H8 173 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 C7orf34Q96L11 122 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 PITX2Q99697 317 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.46
CPNE1-201ENST00000317677 IL1RAPQ9NPH3 570 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 SLC35C2Q9NQQ7 365 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 ACSS1Q9NUB1 689 aaPredicted RBP12.21□□□□□ -0.46
CPNE1-201ENST00000317677 HRASLS2Q9NWW9 162 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 PCDHGB3Q9Y5G1 929 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 GMPPBQ9Y5P6 360 aa12.21□□□□□ -0.46
CPNE1-201ENST00000317677 A0A1W2PQ09 198 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 PCP4L1A6NKN8 68 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CTSBP07858 339 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 ALPPL2P10696 532 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 TYRP1P17643 537 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 GRK5P34947 590 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 BLKP51451 505 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 GBX2P52951 348 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 STXBP1P61764 594 aaKnown RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 RPL6Q02878 288 aaKnown RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 MLC1Q15049 377 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 QPRTQ15274 297 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CEP68Q76N32 757 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CYP4Z1Q86W10 505 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 TAGAPQ8N103 731 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 BAHD1Q8TBE0 780 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 ZCCHC10Q8TBK6 192 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CRELD1Q96HD1 420 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 HSPA12BQ96MM6 686 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 BEX2Q9BXY8 128 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 NLNQ9BYT8 704 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 SLC39A1Q9NY26 324 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 RPS6KA6Q9UK32 745 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 PCDHGA2Q9Y5H1 932 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 PTPRZ1P23471 2315 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-201ENST00000317677 THADAQ6YHU6 1953 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 SCN2AQ99250 2005 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 CCDC88CQ9P219 2028 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 FAM186AA6NE01 2351 aa12.2□□□□□ -0.46
CPNE1-201ENST00000317677 A0A0J9YY10 115 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 MYO1GB0I1T2 1018 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 TLR4O00206 839 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 GFRA3O60609 400 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
CPNE1-201ENST00000317677 PAHP00439 452 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 C9P02748 559 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 TNFRSF1BP20333 461 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 PRKACGP22612 351 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 KRT20P35900 424 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 TSFMP43897 325 aaKnown RBP12.19□□□□□ -0.46
CPNE1-201ENST00000317677 RGS6P49758 472 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 PCBP3P57721 371 aaKnown RBP12.19□□□□□ -0.46
CPNE1-201ENST00000317677 CDK6Q00534 326 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPNE1-201ENST00000317677 RBBP4Q09028 425 aa12.19□□□□□ -0.46
CPNE1-201ENST00000317677 DBPQ10586 325 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms