RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CPOQ8IVL8 374 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 ACBD7Q8N6N7 88 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 TOR1AIP2Q8NFQ8 470 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 GHITMQ9H3K2 345 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 EMC7Q9NPA0 242 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 TEKT2Q9UIF3 430 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 ELF5Q9UKW6 265 aaPredicted RBP17.84■□□□□ 0.45
RTN4-201ENST00000317610 ENTPD4Q9Y227 616 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 ATG4BQ9Y4P1 393 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 HCFC2Q9Y5Z7 792 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 NOTCH4Q99466 2003 aa17.84■□□□□ 0.45
RTN4-201ENST00000317610 ZIC2O95409 532 aaPredicted RBP17.83■□□□□ 0.45
RTN4-201ENST00000317610 CXCL14O95715 111 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 CD53P19397 219 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 PITPNBP48739 271 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 PRDX1Q06830 199 aaKnown RBP17.83■□□□□ 0.45
RTN4-201ENST00000317610 CXXC5Q7LFL8 322 aaKnown RBP17.83■□□□□ 0.45
RTN4-201ENST00000317610 ADCK2Q7Z695 626 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 OR8D1Q8WZ84 308 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 SLC41A3Q96GZ6 507 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 AHCYL2Q96HN2 611 aaKnown RBP17.83■□□□□ 0.45
RTN4-201ENST00000317610 MED28Q9H204 178 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 ABCG5Q9H222 651 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 PRDM7Q9NQW5 492 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 TM7SF3Q9NS93 570 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 KLHL28Q9NXS3 571 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 NTNG1Q9Y2I2 539 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 IRAK3Q9Y616 596 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 CACNG2Q9Y698 323 aa17.83■□□□□ 0.45
RTN4-201ENST00000317610 SHOXO15266 292 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 PIP5K1CO60331 668 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 HIST1H1TP22492 207 aaPredicted RBP17.83■□□□□ 0.44
RTN4-201ENST00000317610 AP2S1P53680 142 aaPredicted RBP17.83■□□□□ 0.44
RTN4-201ENST00000317610 CEBPEQ15744 281 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 ASB18Q6ZVZ8 466 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 AMIGO1Q86WK6 493 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 C12orf40Q86WS4 652 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 OR51G2Q8NGK0 314 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 MS4A6EQ96DS6 147 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 FCRL4Q96PJ5 515 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 ALG8Q9BVK2 526 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.83■□□□□ 0.445e-12■■□□□ 11.4
RTN4-201ENST00000317610 NLGN3Q9NZ94 848 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 ING4Q9UNL4 249 aa17.83■□□□□ 0.44
RTN4-201ENST00000317610 MUC22E2RYF6 1773 aaPredicted RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 AIFM1O95831 613 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 DHFRP00374 187 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 CSNK2A2P19784 350 aaPredicted RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 F8A1P23610 371 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ACSL1P33121 698 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 PER3P56645 1201 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 RGS8P57771 180 aaPredicted RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 CCDC85BQ15834 202 aaPredicted RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 BCL2L15Q5TBC7 163 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 NIPAL3Q6P499 406 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 NUP43Q8NFH3 380 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 OR8K5Q8NH50 307 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 CXorf40AQ8TE69 158 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 TMEM255BQ8WV15 326 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 SAMD8Q96LT4 415 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 MCHR1Q99705 422 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 PPIL3Q9H2H8 161 aaKnown RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 UBQLN3Q9H347 655 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 FN3KQ9H479 309 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ZFP64Q9NPA5 681 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 PTTG3PQ9NZH4 202 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 SLC27A6Q9Y2P4 619 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 AUP1Q9Y679 476 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 A0A1W2PS29 197 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 LINC00862A6NCI5 91 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 PRR23AA6NEV1 266 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 CDC42EP2O14613 210 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 RHOP08100 348 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 F3P13726 295 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 M6PRP20645 277 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 BCL6P41182 706 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 GCGRP47871 477 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 HNRNPA1L2Q32P51 320 aaKnown RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 SLC48A1Q6P1K1 146 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ABHD17CQ6PCB6 329 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 GPR135Q8IZ08 494 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 LRRC17Q8N6Y2 441 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ACOT4Q8N9L9 421 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 OR2A1Q8NGT9 310 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 BRIX1Q8TDN6 353 aaKnown RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 GANCQ8TET4 914 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 NXPE3Q969Y0 559 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ELP4Q96EB1 424 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 ZSWIM3Q96MP5 696 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 DHRS9Q9BPW9 319 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 RANBP3Q9H6Z4 567 aaPredicted RBP17.82■□□□□ 0.44
RTN4-201ENST00000317610 SLCO1C1Q9NYB5 712 aa17.82■□□□□ 0.44
RTN4-201ENST00000317610 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 EDDM13A0A1B0GTR0 161 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 SLC9A3R1O14745 358 aaPredicted RBP17.81■□□□□ 0.44
RTN4-201ENST00000317610 ATP5A1P25705 553 aaKnown RBP17.81■□□□□ 0.44
RTN4-201ENST00000317610 SHC1P29353 583 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 UQCRC1P31930 480 aa17.81■□□□□ 0.44
RTN4-201ENST00000317610 NTRK2Q16620 822 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms