RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 SIGLEC14Q08ET2 396 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 FLYWCH1Q4VC44 716 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 OR5M10Q6IEU7 315 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 MARCH9Q86YJ5 346 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 RBM12BQ8IXT5 1001 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 BBS10Q8TAM1 723 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 TANKQ92844 425 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ISOC1Q96CN7 298 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF501Q96CX3 271 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 THAP11Q96EK4 314 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 CNDP2Q96KP4 475 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF285Q96NJ3 590 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF350Q9GZX5 532 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 PIGUQ9H490 435 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 IGHV5-10-1A0A0J9YXX1 117 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A1B0GTQ1 180 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ENTPD6O75354 484 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ALOX5P09917 674 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 NSDHLQ15738 373 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CD226Q15762 336 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PHF19Q5T6S3 580 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF773Q6PK81 442 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GAB3Q8WWW8 586 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 DGAT2Q96PD7 388 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GABARAPL3Q9BY60 117 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 POLR2J3Q9H1A7 115 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 NXF5Q9H1B4 397 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 OR10A5Q9H207 317 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 TVP23BQ9NYZ1 205 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CLEC2DQ9UHP7 191 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ACAD8Q9UKU7 415 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SPACA6W5XKT8 324 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SMG1Q96Q15 3661 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PNMA8CA0A1B0GUJ8 204 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A1B0GVG6 124 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM183AA6NL82 134 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CTNSO60931 367 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CKMT1AP12532 417 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GNSP15586 552 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ITGA2P17301 1181 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GABRB1P18505 474 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GGT2P36268 569 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 MAP3K8P41279 467 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 STT3AP46977 705 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC35A2P78381 396 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 AQP6Q13520 282 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ARHGAP11BQ3KRB8 267 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SMARCD3Q6STE5 483 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PLEKHM3Q6ZWE6 761 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 TCEANCQ8N8B7 351 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 BBS1Q8NFJ9 593 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM174AQ8TBP5 190 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SH3YL1Q96HL8 342 aaPredicted RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 NODALQ96S42 347 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 DPH1Q9BZG8 443 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 VN1R1Q9GZP7 353 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PRMT8Q9NR22 394 aaPredicted RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 NTMQ9P121 344 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PTGFRNQ9P2B2 879 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 WARS2Q9UGM6 360 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC9A8Q9Y2E8 581 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CARD8Q9Y2G2 431 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 COMMD3-BMI1R4GMX3 469 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 MPDZO75970 2070 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 E9PQ18 207 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 H3BMQ9 156 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CCNYL3P0C7X3 344 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF182P17025 639 aaPredicted RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 TCEA1P23193 301 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GSTM5P46439 218 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CRISP1P54107 249 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC35F1Q5T1Q4 408 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ARHGAP40Q5TG30 622 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 POMZP3Q6PJE2 187 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF730Q6ZMV8 503 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GPR141Q7Z602 305 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 LRRC17Q8N6Y2 441 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 FBLIM1Q8WUP2 373 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 FAR1Q8WVX9 515 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 HDAC2Q92769 488 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 GGHQ92820 318 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 DGCR14Q96DF8 476 aaKnown RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 COG8Q96MW5 612 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 MYCBPQ99417 103 aaPredicted RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ARRDC1-AS1Q9H2J1 176 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 MED20Q9H944 212 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CEP250Q9BV73 2442 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 CACNA1GO43497 2377 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 TRAV27A0A087WT01 109 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 TLX2O43763 284 aaPredicted RBP6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 UGT2B11O75310 529 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 STX11O75558 287 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 PDE9AO76083 593 aa6.47□□□□□ -1.37
LYSMD3-201ENST00000315948 ITIH1P19827 911 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms