RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 SLC9A6Q92581 669 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 YIPF4Q9BSR8 244 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 NUF2Q9BZD4 464 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 KCNK9Q9NPC2 374 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 DUSP22Q9NRW4 184 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 GIN1Q9NXP7 522 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 PPP4R1LQ9P1A2 415 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CAMK2AQ9UQM7 478 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CACNA1DQ01668 2161 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 H0YC42 278 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 SDHDO14521 159 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 C1QCP02747 245 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 TPD52P55327 224 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 OCRLQ01968 901 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 STX5Q13190 355 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 CD226Q15762 336 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 SLC25A35Q3KQZ1 300 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 FBXL19-AS1Q494R0 122 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 OGFOD2Q6N063 350 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 FIGNL1Q6PIW4 674 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 MAVSQ7Z434 540 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 DUSP19Q8WTR2 217 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 TEX37Q96LM6 180 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 TRIB1Q96RU8 372 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 STACQ99469 402 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 DUSP26Q9BV47 211 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 PIGUQ9H490 435 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 CALHM2Q9HA72 323 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 C3orf14Q9HBI5 128 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 JKAMPQ9P055 326 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 EIF3LQ9Y262 564 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 RPH3AQ9Y2J0 694 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 L3MBTL1Q9Y468 752 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 POLQO75417 2590 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 HSPB2A8KAH6 182 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF195O14628 629 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 KCNH1O95259 989 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 TBXA2RP21731 343 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 RFX3P48380 749 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 CCT3P49368 545 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 FOXF2Q12947 444 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 HSPB2Q16082 182 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 VPS26BQ4G0F5 336 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 OR4F3Q6IEY1 312 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 NATD1Q8N6N6 113 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 OR8J2Q8NGG1 315 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 SFXN5Q8TD22 340 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 CDS1Q92903 461 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ARL8AQ96BM9 186 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 TESCQ96BS2 214 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF524Q96C55 264 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 LURAP1Q96LR2 239 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 SFXN2Q96NB2 322 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 NEUROD4Q9HD90 331 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 ATAD3AQ9NVI7 634 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
PPP1CA-201ENST00000312989 HCFC1P51610 2035 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 OR2M5A3KFT3 312 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 CLCA1A8K7I4 914 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 FAM47E-STBD1D6RA91 191 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 OIP5O43482 229 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 TGM6O95932 706 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 ALOX5P09917 674 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 IL12AP29459 219 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 LCN1P31025 176 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 PRIM2P49643 509 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 SUCLG1P53597 346 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 MAD2L1Q13257 205 aaPredicted RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 GANABQ14697 944 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 CASP8Q14790 479 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 SZRD1Q7Z422 152 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 CLEC4FQ8N1N0 589 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 OR4K17Q8NGC6 315 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 OR5AK3PQ8NH89 298 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 MAELQ96JY0 434 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 BTBD2Q9BX70 525 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF629Q9UEG4 869 aaPredicted RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 MRTO4Q9UKD2 239 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF337Q9Y3M9 751 aa13.19□□□□□ -0.3
PPP1CA-201ENST00000312989 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 SHISA8B8ZZ34 492 aa13.18□□□□□ -0.3
PPP1CA-201ENST00000312989 SYT5O00445 386 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms