RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 GPR55Q9Y2T6 319 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CCDC187A0A096LP49 1063 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 LOC100130705A0A1B0GUX0 176 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 A0A1W2PRQ8 180 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 VSTM2BA6NLU5 285 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 SCDO00767 359 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 IGHEP01854 428 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 LYNP07948 512 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CT45A8P0DMV1 189 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CT45A9P0DMV2 189 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ITGAMP11215 1152 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CCL4P13236 92 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 DAPP51397 102 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ATP12AP54707 1039 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 FOXD4Q12950 439 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 KCNAB2Q13303 367 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 DGCR6Q14129 220 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 AP1ARQ63HQ0 302 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 FAHD1Q6P587 224 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 TMEM154Q6P9G4 183 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ANKRD37Q7Z713 158 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 GALNT5Q7Z7M9 940 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 HMGN2P46Q86SG4 172 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ZNF605Q86T29 641 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CHERPQ8IWX8 916 aaKnown RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ZNF440Q8IYI8 595 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 BCORP1Q8N888 145 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 SLC38A9Q8NBW4 561 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 B3GNT7Q8NFL0 401 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 OR5L2Q8NGL0 311 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 OR6T1Q8NGN1 323 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 ZNF721Q8TF20 911 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 SLC35B4Q969S0 331 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 LIN37Q96GY3 246 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 FEVQ99581 238 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 PSD2Q9BQI7 771 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 POLR1BQ9H9Y6 1135 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 TMEM27Q9HBJ8 222 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 UBQLN4Q9NRR5 601 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 SLC22A11Q9NSA0 550 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 RHCGQ9UBD6 479 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 RPS6KB2Q9UBS0 482 aa10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 TESQ9UGI8 421 aaKnown RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
CTDSPL-202ENST00000310189 PRAMEF25A6NGN4 478 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 SAGE2PA6NJ88 616 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 CPSF4LA6NMK7 179 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 BCKDKO14874 412 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 FMO6PO60774 539 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 CSO75390 466 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 REM1O75628 298 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 SEC24DO94855 1032 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 OR5F1O95221 314 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 IL33O95760 270 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 DDAH2O95865 285 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 MT-CO3P00414 261 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ADAP00813 363 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 RPS4Y1P22090 263 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 CLK3P49761 638 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 EEF1A1P68104 462 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ADARB1P78563 741 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 PIN1Q13526 163 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 LAPTM4AQ15012 233 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ISXQ2M1V0 245 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 MRPL2Q5T653 305 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ZNF385CQ66K41 422 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 NPSR1Q6W5P4 371 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 HSDL2Q6YN16 418 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 LANCL3Q6ZV70 420 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 GLRX5Q86SX6 157 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 RBM45Q8IUH3 476 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 C17orf47Q8NEP4 570 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 OR4C15Q8NGM1 316 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 GATA6Q92908 595 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ZG16BQ96DA0 208 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 VMP1Q96GC9 406 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 DHRS1Q96LJ7 313 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 DDA1Q9BW61 102 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 NUDT9Q9BW91 350 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 YTHDF1Q9BYJ9 559 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ACAD8Q9UKU7 415 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 PADI1Q9ULC6 663 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 SLC35A3Q9Y2D2 325 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 GMPPBQ9Y5P6 360 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 HSPE1-MOB4S4R3N1 261 aa10.54□□□□□ -0.72
CTDSPL-202ENST00000310189 ASCC3Q8N3C0 2202 aaKnown RBP10.53□□□□□ -0.72
CTDSPL-202ENST00000310189 TRAPPC13A5PLN9 417 aa10.53□□□□□ -0.72
CTDSPL-202ENST00000310189 CDHR4A6H8M9 788 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms