RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 FZD3Q9NPG1 666 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 ZNF780BQ9Y6R6 833 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 ARID1AO14497 2285 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PROM1O43490 865 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PAK4O96013 591 aaPredicted RBP13.88□□□□□ -0.19
RUNX3-201ENST00000308873 TRAPPC2P0DI81 140 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 TRAPPC2BP0DI82 140 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 CXCL3P19876 107 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PRKACBP22694 351 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 BTN3A2P78410 334 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PRR5P85299 388 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 LINGO2Q7L985 606 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 KLHDC8AQ8IYD2 350 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 ZSWIM3Q96MP5 696 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 C1QTNF6Q9BXI9 259 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PPP1R3EQ9H7J1 279 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 PCDHGB7Q9Y5F8 929 aa13.88□□□□□ -0.19
RUNX3-201ENST00000308873 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 TMEM129A0AVI4 362 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 HNRNPCL2B2RXH8 293 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 EFCAB14O75071 495 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 GATBO75879 557 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 NAA10P41227 235 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 CLDN20P56880 219 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 HYAL4Q2M3T9 481 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 RAB42Q8N4Z0 105 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 DPAGT1Q9H3H5 408 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 USP36Q9P275 1121 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 AK6Q9Y3D8 172 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 IRGMA1A4Y4 181 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 RFPL3O75679 317 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 TP53P04637 393 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 C1orf94Q6P1W5 598 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 OR2T35Q8NGX2 323 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 OR6C2Q9NZP2 312 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 CACNG2Q9Y698 323 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 POM121CA8CG34 1229 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 E9PI62 339 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 E9PQ18 207 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 OLFM2O95897 454 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 LGI1O95970 557 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 ZNF250P15622 560 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 CSNK2A2P19784 350 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 ENDOUP21128 410 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 DNASE1P24855 282 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 POU6F2P78424 691 aaPredicted RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 CDK5Q00535 292 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 DUSP2Q05923 314 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 ZMYND11Q15326 602 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 SLC25A35Q3KQZ1 300 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 TOR2AQ5JU69 321 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
RUNX3-201ENST00000308873 TMEFF1Q8IYR6 380 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 TCTE3Q8IZS6 198 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 SLC16A11Q8NCK7 471 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 OSTF1Q92882 214 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 VOPP1Q96AW1 172 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 DNAJA3Q96EY1 480 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 SLC41A3Q96GZ6 507 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 OR7D2Q96RA2 312 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 GAL3ST1Q99999 423 aa13.87□□□□□ -0.19
RUNX3-201ENST00000308873 ARRDC5A6NEK1 342 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 IGLON5A6NGN9 336 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 SMAD9O15198 467 aaKnown RBP13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ADH1AP07327 375 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 CTSAP10619 480 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 NDUFV2P19404 249 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 GRPRP30550 384 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 PITPNBP48739 271 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ZNF793Q6ZN11 406 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ZNF767PQ75MW2 155 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 OR8D1Q8WZ84 308 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 WDR45Q9Y484 360 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 PLEKHM1Q9Y4G2 1056 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 SIRT4Q9Y6E7 314 aaPredicted RBP13.86□□□□□ -0.19
RUNX3-201ENST00000308873 VCANP13611 3396 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 TRAV27A0A087WT01 109 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 SLC9B1P1A6NJY1 282 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 RHOP08100 348 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ANXA3P12429 323 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 TBXA2RP21731 343 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 MAPK9P45984 424 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 E2F1Q01094 437 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 TSPAN31Q12999 210 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 TP53I3Q53FA7 332 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 LHX8Q68G74 356 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 MORN4Q8NDC4 146 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 OR5W2Q8NH69 310 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ARRDC3Q96B67 414 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 MED30Q96HR3 178 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 C4orf36Q96KX1 117 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 ABHD1Q96SE0 405 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 NANSQ9NR45 359 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 MRPL39Q9NYK5 338 aaKnown RBP13.86□□□□□ -0.19
RUNX3-201ENST00000308873 RDH8Q9NYR8 311 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 TMEM5Q9Y2B1 443 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 SF3B6Q9Y3B4 125 aaKnown RBP13.86□□□□□ -0.19
RUNX3-201ENST00000308873 RNF13O43567 381 aa13.86□□□□□ -0.19
RUNX3-201ENST00000308873 SLC43A1O75387 559 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms