RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 MZT2BQ6NZ67 158 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 MED27Q6P2C8 311 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FIP1L1Q6UN15 594 aaKnown RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PLET1Q6UQ28 207 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 COMMD7Q86VX2 200 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 LRRC56Q8IYG6 542 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM26EQ8N5C1 309 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR8H1Q8NGG4 311 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR5K2Q8NHB8 316 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PPCDCQ96CD2 204 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 KCTD7Q96MP8 289 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 NELL2Q99435 816 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 HDHD5Q9BXW7 423 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 ANKRA2Q9H9E1 313 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 MYNNQ9NPC7 610 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TAC3Q9UHF0 121 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 HSPB11Q9Y547 144 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PCDHGB7Q9Y5F8 929 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRSS38A1L453 326 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SEMA4FO95754 770 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 RAB36O95755 333 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 IFNA7P01567 189 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 STATHP02808 62 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 LIM2P55344 173 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 MPEG1Q2M385 716 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 DCST1Q5T197 706 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM71E1Q6IPT2 247 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 REEP3Q6NUK4 255 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TFAP2EQ6VUC0 442 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SFTPA2Q8IWL1 248 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR52H1Q8NGJ2 320 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC22A8Q8TCC7 542 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SGTBQ96EQ0 304 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TEFMQ96QE5 360 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF416Q9BWM5 594 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR174Q9BXC1 333 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 POLDIP3Q9BY77 421 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 LDAHQ9H6V9 325 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 PCDHB16Q9NRJ7 776 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 RBFOX1Q9NWB1 397 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF224Q9NZL3 707 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 RHCGQ9UBD6 479 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TESQ9UGI8 421 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 PHF11Q9UIL8 331 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ACSL6Q9UKU0 697 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SCML1Q9UN30 329 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 DYRK1BQ9Y463 629 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 COL4A2P08572 1712 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 FEZF1A0PJY2 475 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 APOC1P02654 83 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 CLEC2LP0C7M8 214 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 UQCRC2P22695 453 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ELAVL4P26378 380 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SDC2P34741 201 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 MAPK9P45984 424 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SSTP61278 116 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 HOXC5Q00444 222 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 MXD1Q05195 221 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 C3orf38Q5JPI3 329 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 CEACAM20Q6UY09 585 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF730Q6ZMV8 503 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 C16orf62Q7Z3J2 963 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 DCUN1D3Q8IWE4 304 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TRIM48Q8IWZ4 208 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 LINC01555Q8NAE3 123 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF680Q8NEM1 530 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR52I1Q8NGK6 324 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 WDR48Q8TAF3 677 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 C16orf78Q8WTQ4 265 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 WDR34Q96EX3 536 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 GUCD1Q96NT3 240 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SGPP1Q9BX95 441 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 PPP1R3EQ9H7J1 279 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 FBRSQ9HAH7 460 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 MRPS18AQ9NVS2 196 aaKnown RBP9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 TBC1D29Q9UFV1 150 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC23A1Q9UHI7 598 aa9.67□□□□□ -0.86
APOBEC3F-201ENST00000308521 HEATR5BQ9P2D3 2071 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 IRGMA1A4Y4 181 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 LRRC72A6NJI9 287 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 H7BY64 318 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 HRO43593 1189 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 RASGRP1O95267 797 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 LDOC1O95751 146 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 CSF2P04141 144 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FHP07954 510 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM157BP0CG42 384 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 GAAP10253 952 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF250P15622 560 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 CLDN20P56880 219 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SMIM11AP58511 58 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 C2orf80Q0P641 193 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms