RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 FRS3O43559 492 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 OR10H3O60404 316 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ABCB7O75027 752 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 RPLP0P05388 317 aaKnown RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 HTR1AP08908 422 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 POU2F1P14859 743 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 FBLP22087 321 aaKnown RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ALAS2P22557 587 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 NOVA1P51513 510 aaKnown RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 UGT2B15P54855 530 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 RGS8P57771 180 aaPredicted RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 TAS2R41P59536 307 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 TEKQ02763 1124 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ACY1Q03154 408 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 MAPK14Q16539 360 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 PRAMEF17Q5VTA0 474 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 BROXQ5VW32 411 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 FIGNL1Q6PIW4 674 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 CD300LDQ6UXZ3 194 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 Q6ZPB1 254 aaPredicted RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ENTHD1Q8IYW4 607 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 OR7G1Q8NGA0 311 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 CNDP2Q96KP4 475 aaKnown RBP11.02□□□□□ -0.65
TRIM40-205ENST00000307859 CNPPD1Q9BV87 410 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 UCK2Q9BZX2 261 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 LRRN3Q9H3W5 708 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 CXorf56Q9H5V9 222 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF304Q9HCX3 659 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 REV1Q9UBZ9 1251 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 SRPK3Q9UPE1 567 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 ERVK-19Q9WJR5 959 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 DTX4Q9Y2E6 619 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 PCDHGA5Q9Y5G8 931 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 CDHR4A6H8M9 788 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ZAR1LA6NP61 321 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 PEX12O00623 359 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 AP3D1O14617 1153 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 WBP4O75554 376 aaKnown RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 CYP7B1O75881 506 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 OR5F1O95221 314 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 IFNA16P05015 189 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 CKMT1AP12532 417 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 OSMP13725 252 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 JUNBP17275 347 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ZNF136P52737 540 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 CRISP1P54107 249 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 RHAGQ02094 409 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ST3GAL3Q11203 375 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 TRAM2Q15035 370 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 CLPPQ16740 277 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 TRIM61Q5EBN2 209 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ENTPD8Q5MY95 495 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 NPSR1Q6W5P4 371 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 RBM44Q6ZP01 1051 aaKnown RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 ZAR1Q86SH2 424 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 OR4K5Q8NGD3 323 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 APH1BQ8WW43 257 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 DGCR14Q96DF8 476 aaKnown RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 PTCHD1Q96NR3 888 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 MCHR1Q99705 422 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 POLR2J2Q9GZM3 115 aaKnown RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 POLR2J3Q9H1A7 115 aaKnown RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 OR10A5Q9H207 317 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 PAK1IP1Q9NWT1 392 aaPredicted RBP11.01□□□□□ -0.65
TRIM40-205ENST00000307859 RNF6Q9Y252 685 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
TRIM40-205ENST00000307859 NPIPA5A0A0B4J1W7 369 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 IGHV5-10-1A0A0J9YXX1 117 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 TCRBV16S1A1N1A0A5B0 115 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CPSF4LA6NMK7 179 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 C17orf105B2RV13 164 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 NPIPA7E9PJI5 369 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 IGKV1D-16P01601 117 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 SYPP08247 313 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CCNYL3P0C7X3 344 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 NPIPA8P0DM63 369 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CT45A8P0DMV1 189 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CT45A9P0DMV2 189 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 GABRB1P18505 474 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 MMP11P24347 488 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CHMP24386 653 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 EEF1B2P24534 225 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 FMO3P31513 532 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 IFNA8P32881 189 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 PGDP52209 483 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 EFNA3P52797 238 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 SLC35A2P78381 396 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 ALDH6A1Q02252 535 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 FOXD4Q12950 439 aaPredicted RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 ILKQ13418 452 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 PTGES3Q15185 160 aaKnown RBP11□□□□□ -0.65
TRIM40-205ENST00000307859 CNPY1Q3B7I2 92 aa11□□□□□ -0.65
TRIM40-205ENST00000307859 CT45A2Q5DJT8 189 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms