RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SLC23A2Q9UGH3 650 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 DNASE1P24855 282 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 P2RX3P56373 397 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 DSG2Q14126 1118 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 PUS10Q3MIT2 529 aaKnown RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 DEFB134Q4QY38 66 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM150AQ86TG1 271 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 GPR135Q8IZ08 494 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 PROKR2Q8NFJ6 384 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FIBINQ8TAL6 211 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 CXorf40AQ8TE69 158 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 IRF7Q92985 503 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 RFT1Q96AA3 541 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 SLC6A18Q96N87 628 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FUZQ9BT04 418 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 SEMA4CQ9C0C4 833 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 C12orf4Q9NQ89 552 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 NFKBIL1Q9UBC1 381 aaPredicted RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 HMGN4O00479 90 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FAAHO00519 579 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 MSL3P1P0C860 447 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 OPRD1P41143 372 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 LYPD4Q6UWN0 246 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 SLC36A4Q6YBV0 504 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 OR2W5A6NFC9 320 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 AKAP8O43823 692 aaKnown RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 RGS11O94810 467 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 CTSLP07711 333 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 C6P13671 934 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 ERP29P30040 261 aaKnown RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 RPS27P42677 84 aaKnown RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 NUDT13Q86X67 352 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
PTPN9-201ENST00000306726 PLEKHB1Q9UF11 243 aaPredicted RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 PCYT1BQ9Y5K3 369 aaPredicted RBP13.66□□□□□ -0.22
PTPN9-201ENST00000306726 IGLON5A6NGN9 336 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 LRRN3E7EW58 273 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 H0YIV9 168 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
PTPN9-201ENST00000306726 ALPPP05187 535 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 DDCP20711 480 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 MVDP53602 400 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SRSF5Q13243 272 aaKnown RBP13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 MEIOBQ8N635 442 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
PTPN9-201ENST00000306726 OR4K13Q8NH42 304 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SPATA9Q9BWV2 254 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 LRRN3Q9H3W5 708 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 FN3KQ9H479 309 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 IGFLR1Q9H665 355 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SLC7A7Q9UM01 511 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TRBV5-4A0A0C4DH59 114 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 PLATP00750 562 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 LAMP2P13473 410 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 CXCL3P19876 107 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SLC1A3P43003 542 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SQSTM1Q13501 440 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM215Q68D42 235 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 CPXM2Q8N436 756 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
PTPN9-201ENST00000306726 NKD1Q969G9 470 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SH3D21A4FU49 640 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 NT5EP21589 574 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 DDOSTP39656 456 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 GPR176Q14439 515 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM99Q8N816 258 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 OR4C15Q8NGM1 316 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 LGR4Q9BXB1 951 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TRPV4Q9HBA0 871 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 STARD5Q9NSY2 213 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 TAS2R7Q9NYW3 318 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
PTPN9-201ENST00000306726 SHISA3A0PJX4 238 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 FAM25EA8MYX2 175 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 LGALS8O00214 317 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 MPC1LP0DKB6 136 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 SMIM11AP58511 58 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 SLC9A5Q14940 896 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.65□□□□□ -0.23
PTPN9-201ENST00000306726 SLC25A35Q3KQZ1 300 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 TOR1AIP1Q5JTV8 583 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 ALKAL2Q6UX46 152 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 HTR3DQ70Z44 454 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.23
PTPN9-201ENST00000306726 ADGRF3Q8IZF5 1079 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 FAM109AQ8N4B1 249 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms