RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.41■■□□□ 1.18
HOXC9-201ENST00000303450 COL6A6A6NMZ7 2263 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 NPIPA5A0A0B4J1W7 369 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 NPIPA7E9PJI5 369 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 SCDO00767 359 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 SCO2O43819 266 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 OXSR1O95747 527 aaPredicted RBP22.41■■□□□ 1.18
HOXC9-201ENST00000303450 NGFRP08138 427 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 CHRM4P08173 479 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 GUSBP08236 651 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 NPIPA8P0DM63 369 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 DCTP40126 519 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 MASP1P48740 699 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 CRISP3P54108 245 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 PMP22Q01453 160 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 TYW3Q6IPR3 259 aaKnown RBP22.41■■□□□ 1.18
HOXC9-201ENST00000303450 FRRS1Q6ZNA5 592 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 ZNF527Q8NB42 609 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 POGLUT1Q8NBL1 392 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 RNF138Q8WVD3 245 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 TMEM19Q96HH6 336 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 JSRP1Q96MG2 331 aaPredicted RBP22.41■■□□□ 1.18
HOXC9-201ENST00000303450 GPATCH1Q9BRR8 931 aaKnown RBP22.41■■□□□ 1.18
HOXC9-201ENST00000303450 L3MBTL1Q9Y468 752 aa22.41■■□□□ 1.18
HOXC9-201ENST00000303450 CHD6Q8TD26 2715 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 C2orf72A6NCS6 295 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 TTLL8A6PVC2 850 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 C5orf58C9J3I9 102 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 ZIC2O95409 532 aaPredicted RBP22.4■■□□□ 1.18
HOXC9-201ENST00000303450 PTGDSP41222 190 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 ATP12AP54707 1039 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 MXRA7P84157 204 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 CHRNEQ04844 493 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 SERPINA11Q86U17 422 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 ZNF619Q8N2I2 560 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 SAP130Q9H0E3 1048 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 TMEM38AQ9H6F2 299 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 TUBA8Q9NY65 449 aaPredicted RBP22.4■■□□□ 1.18
HOXC9-201ENST00000303450 RALYQ9UKM9 306 aaKnown RBP22.4■■□□□ 1.18
HOXC9-201ENST00000303450 BOKQ9UMX3 212 aaPredicted RBP22.4■■□□□ 1.18
HOXC9-201ENST00000303450 WIF1Q9Y5W5 379 aa22.4■■□□□ 1.18
HOXC9-201ENST00000303450 PINLYPA6NC86 204 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 KIAA0513O60268 411 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 PRB1P04280 392 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 ARAFP10398 606 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 RFC3P40938 356 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 PLGLB1Q02325 96 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 MAPK11Q15759 364 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 FAM180AQ6UWF9 173 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 MARCH3Q86UD3 253 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 CISD2Q8N5K1 135 aaKnown RBP22.39■■□□□ 1.17
HOXC9-201ENST00000303450 ZFP62Q8NB50 900 aaPredicted RBP22.39■■□□□ 1.17
HOXC9-201ENST00000303450 ZNF597Q96LX8 424 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 TAAR6Q96RI8 345 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 SLC38A1Q9H2H9 487 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 PIF1Q9H611 641 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 RUBCNLQ9H714 662 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 SDHAF3Q9NRP4 125 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 AP3M1Q9Y2T2 418 aa22.39■■□□□ 1.17
HOXC9-201ENST00000303450 ALG1L2C9J202 215 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 TRIM3O75382 744 aaPredicted RBP22.38■■□□□ 1.17
HOXC9-201ENST00000303450 CALB2P22676 271 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 PSME3P61289 254 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 CDK6Q00534 326 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 ADRM1Q16186 407 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 ZNF630Q2M218 657 aaPredicted RBP22.38■■□□□ 1.17
HOXC9-201ENST00000303450 C8orf82Q6P1X6 216 aaPredicted RBP22.38■■□□□ 1.17
HOXC9-201ENST00000303450 APOOLQ6UXV4 268 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 METTL25Q8N6Q8 603 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 ZNF614Q8N883 585 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 NFKBIDQ8NI38 313 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 TMEM41AQ96HV5 264 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 FRMD6Q96NE9 622 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 TREX2Q9BQ50 279 aaPredicted RBP22.38■■□□□ 1.17
HOXC9-201ENST00000303450 MTHFD2LQ9H903 347 aaPredicted RBP22.38■■□□□ 1.17
HOXC9-201ENST00000303450 ZFP64Q9NPA5 681 aa22.38■■□□□ 1.17
HOXC9-201ENST00000303450 CCT8L1PA6NM43 557 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 NPIPB9F8W1W9 429 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 NDUFB5O43674 189 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 ANGPTL1O95841 491 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 CRYABP02511 175 aaKnown RBP22.37■■□□□ 1.17
HOXC9-201ENST00000303450 SLC7A2P52569 658 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 GAS1P54826 345 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 RBBP4Q09028 425 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 FOXO1Q12778 655 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 SCARB2Q14108 478 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 AP1ARQ63HQ0 302 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 C11orf65Q8NCR3 313 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 PMM1Q92871 262 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 NTNG2Q96CW9 530 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 SPATA9Q9BWV2 254 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 TTTY12Q9BZ98 90 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 CMTM6Q9NX76 183 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 PPP4R1LQ9P1A2 415 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 DTNAQ9Y4J8 743 aa22.37■■□□□ 1.17
HOXC9-201ENST00000303450 A0A0G2JPF8 293 aa22.36■■□□□ 1.17
HOXC9-201ENST00000303450 A0A1W2PQD3 144 aa22.36■■□□□ 1.17
HOXC9-201ENST00000303450 HNRNPCL2B2RXH8 293 aa22.36■■□□□ 1.17
HOXC9-201ENST00000303450 HNRNPCL3B7ZW38 293 aa22.36■■□□□ 1.17
HOXC9-201ENST00000303450 H3BNH8 94 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms