RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TAF8Q7Z7C8 310 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 TBC1D19Q8N5T2 526 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CDS1Q92903 461 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 FAM46AQ96IP4 442 aaKnown RBP9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SNX18Q96RF0 628 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 HDHD5Q9BXW7 423 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 KCNN2Q9H2S1 579 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CCNB1IP1Q9NPC3 277 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 DCAF16Q9NXF7 216 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SLC17A4Q9Y2C5 497 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SLC9A8Q9Y2E8 581 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CIB4A0PJX0 185 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 B4DGG1 531 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SHOXO15266 292 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 GMFGO60234 142 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CDK1P06493 297 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SLC35G6P0C7Q6 338 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 JUNDP17535 347 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 NT5EP21589 574 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 MPIP34949 423 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 KCNJ5P48544 419 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 TPMTP51580 245 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SLC16A1P53985 500 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CAV3P56539 151 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 ERV3-1Q14264 604 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 GINS1Q14691 196 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 EXOSC7Q15024 291 aaKnown RBP9.46□□□□□ -0.9
FOXN4-201ENST00000299162 TRMT12Q53H54 448 aaKnown RBP9.46□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF730Q6ZMV8 503 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 GHDCQ8N2G8 530 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 OR13H1Q8NG92 308 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 GRPEL2Q8TAA5 225 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 SUN3Q8TAQ9 357 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 DNAJA3Q96EY1 480 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 BMFQ96LC9 184 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 ZNF354BQ96LW1 612 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 OR7D2Q96RA2 312 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 GABARAPL3Q9BY60 117 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 FANCFQ9NPI8 374 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 DZANK1Q9NVP4 752 aa9.46□□□□□ -0.9
FOXN4-201ENST00000299162 CENPVL1A0A0U1RR11 272 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 OR5K3A6NET4 321 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 OR2B3O76000 313 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 NR2F6P10588 404 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 MMP11P24347 488 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ATP6V1E1P36543 226 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PDX1P52945 283 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 RGS8P57771 180 aaPredicted RBP9.45□□□□□ -0.9
FOXN4-201ENST00000299162 VSX2P58304 361 aaPredicted RBP9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 KIAA1161Q6NSJ0 714 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 VN1R4Q7Z5H5 301 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 LINC00518Q8N0U6 118 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 MRPL38Q96DV4 380 aaKnown RBP9.45□□□□□ -0.9
FOXN4-201ENST00000299162 WDR92Q96MX6 357 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 MGLLQ99685 303 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PLA2G12AQ9BZM1 189 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 CDCP1Q9H5V8 836 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 IL21RQ9HBE5 538 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 THSD1Q9NS62 852 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 C2orf42Q9NWW7 574 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 HRASLS2Q9NWW9 162 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ENOPH1Q9UHY7 261 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 CD207Q9UJ71 328 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ASB4Q9Y574 426 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 TEX46H3BTG2 121 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 HCRTR1O43613 425 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PRKYO43930 277 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PDE9AO76083 593 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 OR7A10O76100 309 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 SLITRK5O94991 958 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 SHC2P98077 582 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 FUT5Q11128 374 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 MRPL28Q13084 256 aaKnown RBP9.45□□□□□ -0.9
FOXN4-201ENST00000299162 FLYWCH1Q4VC44 716 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 TOR2AQ5JU69 321 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 SLC35F1Q5T1Q4 408 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ACSM5Q6NUN0 579 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 SLC30A6Q6NXT4 461 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PGBD2Q6P3X8 592 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ZER1Q7Z7L7 766 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 FAM46DQ8NEK8 389 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 OR7G2Q8NG99 324 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ELSPBP1Q96BH3 223 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 LRR1Q96L50 414 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 PITX2Q99697 317 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 CCDC3Q9BQI4 270 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 TIMM29Q9BSF4 260 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ASPNQ9BXN1 380 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 BRD7Q9NPI1 651 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 COL4A3Q01955 1670 aa9.45□□□□□ -0.9
FOXN4-201ENST00000299162 ERGP11308 486 aa9.44□□□□□ -0.9
FOXN4-201ENST00000299162 KHKP50053 298 aa9.44□□□□□ -0.9
FOXN4-201ENST00000299162 PRR5P85299 388 aa9.44□□□□□ -0.9
FOXN4-201ENST00000299162 RGS1Q08116 209 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms