RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 PDZK1Q5T2W1 519 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-201ENST00000297615 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 OR2L8Q8NGY9 312 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 A4GALTQ9NPC4 353 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ENOPH1Q9UHY7 261 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 FBXL4Q9UKA2 621 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SLC17A4Q9Y2C5 497 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 WBP11Q9Y2W2 641 aaKnown RBP12.64□□□□□ -0.39
TTC39B-201ENST00000297615 WDR45Q9Y484 360 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 GVINP1Q7Z2Y8 2422 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 FABP12A6NFH5 140 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TAF4O00268 1085 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 PROM1O43490 865 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 PLRG1O43660 514 aaKnown RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 CLUP10909 449 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 GABRG2P18507 467 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 CASP3P42574 277 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLX4IPQ5VYV7 408 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 KIF18BQ86Y91 864 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TMEM151BQ8IW70 566 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 OR8D4Q8NGM9 314 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 PFN4Q8NHR9 129 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TM9SF4Q92544 642 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 DCLRE1CQ96SD1 692 aaKnown RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 PELI2Q9HAT8 420 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ACTR10Q9NZ32 417 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 KLK4Q9Y5K2 254 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 MPZL2O60487 215 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 CLEC3AO75596 197 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ALPPP05187 535 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SCG5P05408 212 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 F3P13726 295 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ST6GAL1P15907 406 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 LTBRP36941 435 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 BTG2P78543 158 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 NCF4Q15080 339 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ENTPD8Q5MY95 495 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 MRPL38Q96DV4 380 aaKnown RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 LMF1Q96S06 567 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ZNF559Q9BR84 538 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TP63Q9H3D4 680 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SYNDIG1Q9H7V2 258 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TXNL4BQ9NX01 149 aaKnown RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 EP300Q09472 2414 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 TRAV27A0A087WT01 109 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SH3D21A4FU49 640 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 A8MVJ9 347 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLITRK5O94991 958 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 IFNA16P05015 189 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 CRYBB2P43320 205 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLC48A1Q6P1K1 146 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 UBE2Q1Q7Z7E8 422 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 OR51G2Q8NGK0 314 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 FAM174AQ8TBP5 190 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 APOBEC4Q8WW27 367 aaKnown RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 ASB15Q8WXK1 588 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SAMD8Q96LT4 415 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 SLC38A1Q9H2H9 487 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 MAN2C1Q9NTJ4 1040 aa12.63□□□□□ -0.39
TTC39B-201ENST00000297615 CRNNQ9UBG3 495 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-201ENST00000297615 PCDH15Q96QU1 1955 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 SOCS6O14544 535 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 OR10H2O60403 315 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 SEMA4FO95754 770 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 THEGLP0DJG4 465 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 SAGP10523 405 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-201ENST00000297615 CD83Q01151 205 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 RGS1Q08116 209 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 FLYWCH1Q4VC44 716 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 RERGQ96A58 199 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-201ENST00000297615 GFM1Q96RP9 751 aaKnown RBP12.62□□□□□ -0.39
TTC39B-201ENST00000297615 NEK6Q9HC98 313 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 C20orf141Q9NUB4 165 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 CPNE7Q9UBL6 633 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 STUB1Q9UNE7 303 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 TNRC18O15417 2968 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-201ENST00000297615 ARID1AO14497 2285 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 CDC42EP2O14613 210 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 IMPA2O14732 288 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 LALBAP00709 142 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 KHKP50053 298 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 PRKCDQ05655 676 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 PRR22Q8IZ63 422 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 RIPOR3Q96MK2 946 aa12.62□□□□□ -0.39
TTC39B-201ENST00000297615 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms