RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 LRRN3Q9H3W5 708 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 SAV1Q9H4B6 383 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 BTNL2Q9UIR0 455 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 TAPBPO15533 448 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SOX30O94993 753 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 AGR2O95994 175 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 VAMP1P23763 118 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 EIF1AXP47813 144 aaKnown RBP12.66□□□□□ -0.38
HPS3-201ENST00000296051 ZMAT1Q5H9K5 638 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 OR5AR1Q8NGP9 310 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 NAT6Q93015 286 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 ZNF419Q96HQ0 510 aaPredicted RBP12.66□□□□□ -0.38
HPS3-201ENST00000296051 CCDC115Q96NT0 180 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 FOLH1BQ9HBA9 442 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SCN1AP35498 2009 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 CIB4A0PJX0 185 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 ASPDHA6ND91 283 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SEC14L5O43304 696 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 ARL6IP5O75915 188 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 MMP2P08253 660 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 GABRA3P34903 492 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SLC19A1P41440 591 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 PUM1Q14671 1186 aaKnown RBP eCLIP12.66□□□□□ -0.38
HPS3-201ENST00000296051 CDK10Q15131 360 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 CCDC58Q4VC31 144 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 TMEM225Q6GV28 225 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 PAQR6Q6TCH4 344 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 TMEM107Q6UX40 140 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 HSD11B1LQ7Z5J1 315 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 NRMQ8IXM6 262 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 DIO2Q92813 273 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 TRIM2Q9C040 744 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 B3GNT4Q9C0J1 378 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 BHLHE41Q9C0J9 482 aaPredicted RBP12.66□□□□□ -0.38
HPS3-201ENST00000296051 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 CTBP2P56545 445 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 PLCXD2Q0VAA5 305 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 SCRN3Q0VDG4 424 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 RIMKLAQ8IXN7 391 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 RASGEF1AQ8N9B8 481 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 GALNT11Q8NCW6 608 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 ELMOD3Q96FG2 381 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 OR1F2PQ96R84 312 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 THSD1Q9NS62 852 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
HPS3-201ENST00000296051 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
HPS3-201ENST00000296051 C5orf51A6NDU8 294 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 PCGF2P35227 344 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 EFR3AQ14156 821 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 FGL2Q14314 439 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ARMC10Q8N2F6 343 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 FAM109AQ8N4B1 249 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OSTF1Q92882 214 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ARRDC3Q96B67 414 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SLC39A13Q96H72 371 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 PRR14Q9BWN1 585 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 FOXQ1Q9C009 403 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 TTC3P53804 2025 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OR2AT4A6NND4 320 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 GATBO75879 557 aaKnown RBP12.65□□□□□ -0.38
HPS3-201ENST00000296051 GIFP27352 417 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SHC2P98077 582 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SYT14Q8NB59 555 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OR2T33Q8NG76 320 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OR5P2Q8WZ92 322 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SLC6A16Q9GZN6 736 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ACTL8Q9H568 366 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 GAREM1Q9H706 876 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OR6C2Q9NZP2 312 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 B4GALT7Q9UBV7 327 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 PPT2Q9UMR5 302 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 FARSAQ9Y285 508 aaKnown RBP12.65□□□□□ -0.38
HPS3-201ENST00000296051 SEC16AO15027 2179 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ZNF3P17036 446 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 AOAHP28039 575 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 PDHA2P29803 388 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 BMP8BP34820 402 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 TMEM44Q2T9K0 475 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 BMP8AQ7Z5Y6 402 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 POT1Q9NUX5 634 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 WASH4PA8MWX3 477 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ARPC5O15511 151 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 FABP7O15540 132 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SCO1O75880 301 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ZNF432O94892 652 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 RENP00797 406 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 SGSHP51688 502 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 MAPK14Q16539 360 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms