RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 PPP4R1LQ9P1A2 415 aa12.18□□□□□ -0.46
VPS28-201ENST00000292510 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
VPS28-201ENST00000292510 SLC6A5Q9Y345 797 aa12.18□□□□□ -0.46
VPS28-201ENST00000292510 SPTAN1Q13813 2472 aaKnown RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 AQP7O14520 342 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 GMFGO60234 142 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 CBR3O75828 277 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ANP32DO95626 131 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 OXSR1O95747 527 aaPredicted RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 ANGPTL1O95841 491 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ATP6V1C1P21283 382 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 TBXA2RP21731 343 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ARFIP2P53365 341 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 GYS2P54840 703 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 LRRC74AQ0VAA2 488 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 FUT5Q11128 374 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 WIPI1Q5MNZ9 446 aaPredicted RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 COX20Q5RI15 118 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 C6orf10Q5SRN2 563 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 MSANTD1Q6ZTZ1 278 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 FAM83FQ8NEG4 500 aaPredicted RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 FAM57AQ8TBR7 257 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 MIPOL1Q8TD10 442 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 GTF2H4Q92759 462 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ITCHQ96J02 903 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 PHF12Q96QT6 1004 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 SDF2Q99470 211 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 G6PC3Q9BUM1 346 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 TBL1XR1Q9BZK7 514 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 DSN1Q9H410 356 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ZNF385DQ9H6B1 395 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 RMND5AQ9H871 391 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 ACKR4Q9NPB9 350 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 SLC52A3Q9NQ40 469 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 MED11Q9P086 117 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 SLAMF8Q9P0V8 285 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
VPS28-201ENST00000292510 USP9YO00507 2555 aaPredicted RBP12.17□□□□□ -0.46
VPS28-201ENST00000292510 DOPEY1Q5JWR5 2465 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 GTF3C1Q12789 2109 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 A0A1B0GUH1 482 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PRAMEF27A3QJZ7 478 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 DUXAA6NLW8 204 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 HMGN4O00479 90 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 CCL21O00585 134 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PRRG2O14669 202 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 SUSD5O60279 629 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 HCN1O60741 890 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 LDLRP01130 860 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 DCTP40126 519 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 CLK3P49761 638 aaKnown RBP12.16□□□□□ -0.46
VPS28-201ENST00000292510 KHKP50053 298 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 CASP6P55212 293 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 CD226Q15762 336 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.16□□□□□ -0.46
VPS28-201ENST00000292510 FLYWCH1Q4VC44 716 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PAGE3Q5JUK9 113 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 CHDHQ8NE62 594 aaPredicted RBP12.16□□□□□ -0.46
VPS28-201ENST00000292510 OR2M3Q8NG83 312 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 OR4K17Q8NGC6 315 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 NEIL3Q8TAT5 605 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 ZFP90Q8TF47 636 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 RELTQ969Z4 430 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PAIP1Q9H074 479 aaKnown RBP12.16□□□□□ -0.46
VPS28-201ENST00000292510 UBQLN4Q9NRR5 601 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PNPLA3Q9NST1 481 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 ACAD8Q9UKU7 415 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 TRIM33Q9UPN9 1127 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PCDHGB3Q9Y5G1 929 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
VPS28-201ENST00000292510 MED12Q93074 2177 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 PTPN13Q12923 2485 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 FREM3P0C091 2139 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
VPS28-201ENST00000292510 C15orf38-AP3S2A0A0A6YYH1 394 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 CENPVL1A0A0U1RR11 272 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 NDUFB5O43674 189 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 FCMRO60667 390 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 NGFRP08138 427 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 HPGDP15428 266 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 DPP4P27487 766 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 LCN1P31025 176 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 SRD5A2P31213 254 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 MVDP53602 400 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 GPR68Q15743 365 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 ARHGAP11BQ3KRB8 267 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 GXYLT1Q4G148 440 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 DCST1Q5T197 706 aa12.15□□□□□ -0.46
VPS28-201ENST00000292510 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS28-201ENST00000292510 MYO7BQ6PIF6 2116 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms