RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RTN4RQ9BZR6 473 aa24.54■■□□□ 1.52
SSU72-201ENST00000291386 NMUR2Q9GZQ4 415 aa24.54■■□□□ 1.52
SSU72-201ENST00000291386 ZNF350Q9GZX5 532 aa24.54■■□□□ 1.52
SSU72-201ENST00000291386 SLC25A37Q9NYZ2 338 aa24.54■■□□□ 1.52
SSU72-201ENST00000291386 SLAMF8Q9P0V8 285 aa24.54■■□□□ 1.52
SSU72-201ENST00000291386 NPIPB9F8W1W9 429 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 ANGPT2O15123 496 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 SCO2O43819 266 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 HCN1O60741 890 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 CCDC22O60826 627 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 STX11O75558 287 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 ATP12AP54707 1039 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 RBPJQ06330 500 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 FUT5Q11128 374 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.53■■□□□ 1.523e-6■■□□□ 13.3
SSU72-201ENST00000291386 COX20Q5RI15 118 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 DLEU7Q6UYE1 221 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 C16orf62Q7Z3J2 963 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 OIT3Q8WWZ8 545 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 DTNBP1Q96EV8 351 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 SAP130Q9H0E3 1048 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 RAD21L1Q9H4I0 556 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 LIPT1Q9Y234 373 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 ZNF835Q9Y2P0 537 aa24.53■■□□□ 1.52
SSU72-201ENST00000291386 ZNF407Q9C0G0 2248 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 IGLV3-32A0A0A0MS00 114 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 PRAMEF27A3QJZ7 478 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 CLIC1O00299 241 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 SUSD5O60279 629 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 ANGPTL1O95841 491 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 CELA3AP09093 270 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 GDF1P27539 372 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 C17orf67Q0P5P2 114 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 MAPRE2Q15555 327 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 FLYWCH1Q4VC44 716 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 COQ5Q5HYK3 327 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 ARHGAP11AQ6P4F7 1023 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 TRILQ7L0X0 811 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 MARCH3Q86UD3 253 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 RETREG3Q86VR2 466 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 FADS6Q8N9I5 356 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 PNPT1Q8TCS8 783 aaKnown RBP24.52■■□□□ 1.52
SSU72-201ENST00000291386 ROPN1LQ96C74 230 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 AURKBQ96GD4 344 aaPredicted RBP24.52■■□□□ 1.52
SSU72-201ENST00000291386 FAM107BQ9H098 131 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 THUMPD1Q9NXG2 353 aaKnown RBP24.52■■□□□ 1.52
SSU72-201ENST00000291386 VAPAQ9P0L0 249 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 PPP4R1LQ9P1A2 415 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 MRPS18CQ9Y3D5 142 aaKnown RBP24.52■■□□□ 1.52
SSU72-201ENST00000291386 HRH3Q9Y5N1 445 aa24.52■■□□□ 1.52
SSU72-201ENST00000291386 HELZ2Q9BYK8 2649 aaKnown RBP24.52■■□□□ 1.52
SSU72-201ENST00000291386 UBR5O95071 2799 aaPredicted RBP24.51■■□□□ 1.51
SSU72-201ENST00000291386 SCDO00767 359 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 FREM3P0C091 2139 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 PPIBP23284 216 aaKnown RBP24.51■■□□□ 1.51
SSU72-201ENST00000291386 DCTP40126 519 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 GTF3C1Q12789 2109 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 FADDQ13158 208 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 KLHL26Q53HC5 615 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.51■■□□□ 1.51
SSU72-201ENST00000291386 Q6ZPB1 254 aaPredicted RBP24.51■■□□□ 1.51
SSU72-201ENST00000291386 FGD2Q7Z6J4 655 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 MISPQ8IVT2 679 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 ZNF527Q8NB42 609 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 TRNT1Q96Q11 434 aaKnown RBP24.51■■□□□ 1.51
SSU72-201ENST00000291386 CAPN7Q9Y6W3 813 aa24.51■■□□□ 1.51
SSU72-201ENST00000291386 FASNP49327 2511 aaKnown RBP24.51■■□□□ 1.51
SSU72-201ENST00000291386 DNAJC13O75165 2243 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 A0A1B0GTH9 108 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 B4DXG7 233 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 CDC40O60508 579 aaKnown RBP eCLIP24.5■■□□□ 1.51
SSU72-201ENST00000291386 FCMRO60667 390 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 ZIC2O95409 532 aaPredicted RBP24.5■■□□□ 1.51
SSU72-201ENST00000291386 STSP08842 583 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 BMP2P12643 396 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 HPGDP15428 266 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 CRATP43155 626 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 HSF1Q00613 529 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 RGNQ15493 299 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 ZNF141Q15928 474 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 EIF2S3LQ2VIR3 472 aaKnown RBP24.5■■□□□ 1.51
SSU72-201ENST00000291386 TYW3Q6IPR3 259 aaKnown RBP24.5■■□□□ 1.51
SSU72-201ENST00000291386 MTERF4Q7Z6M4 381 aaKnown RBP24.5■■□□□ 1.51
SSU72-201ENST00000291386 PIGWQ7Z7B1 504 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 LIPGQ9Y5X9 500 aa24.5■■□□□ 1.51
SSU72-201ENST00000291386 TRGV5A0A0B4J1U4 118 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 BBIP1A8MTZ0 92 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 FBP2O00757 339 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 AQP7O14520 342 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 NDUFB5O43674 189 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 KIAA0513O60268 411 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 PDE9AO76083 593 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 SRD5A2P31213 254 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 FRRS1Q6ZNA5 592 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 LRRC74BQ6ZQY2 392 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 DHDDSQ86SQ9 333 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 SPPL2CQ8IUH8 684 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 OR2M3Q8NG83 312 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 DUSP19Q8WTR2 217 aa24.49■■□□□ 1.51
SSU72-201ENST00000291386 PMM1Q92871 262 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms