RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 IRGMA1A4Y4 181 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 NPIPA7E9PJI5 369 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 CCNKO75909 580 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 GKN3PP0CG01 181 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 NPIPA8P0DM63 369 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 HOXB2P14652 356 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 POLR2CP19387 275 aaPredicted RBP18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 GABRA5P31644 462 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 MAPK14Q16539 360 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 PGGHGQ32M88 737 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 PRSS41Q7RTY9 318 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 PEX5LQ8IYB4 626 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 OR2L13Q8N349 312 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 PRRG3Q9BZD7 231 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 MTHFD2LQ9H903 347 aaPredicted RBP18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 TBC1D17Q9HA65 648 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 ADAP2Q9NPF8 381 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 FBXO34Q9NWN3 711 aa18.6■□□□□ 0.57
SCUBE1-201ENST00000290460 GSAPA4D1B5 854 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 FABP12A6NFH5 140 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 SOCS6O14544 535 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 LDB3O75112 727 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 STAT5AP42229 794 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 GPR50Q13585 617 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 ANKRD54Q6NXT1 300 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 SETD6Q8TBK2 473 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 NT5CQ8TCD5 201 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 ZFPM2Q8WW38 1151 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 HDHD5Q9BXW7 423 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 MCOLN1Q9GZU1 580 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 MARCH7Q9H992 704 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 DZANK1Q9NVP4 752 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 DAPP1Q9UN19 280 aa18.59■□□□□ 0.57
SCUBE1-201ENST00000290460 TFECO14948 347 aaPredicted RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 OR5F1O95221 314 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 RASGRP1O95267 797 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 EIF2S1P05198 315 aaKnown RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 LAMP2P13473 410 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 UGT2B7P16662 529 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 CELP19835 753 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 TNFRSF4P43489 277 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 GCGRP47871 477 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 ZNF136P52737 540 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 ZNF155Q12901 538 aaPredicted RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 SUZ12Q15022 739 aaKnown RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 RSBN1Q5VWQ0 802 aaPredicted RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 RFKQ969G6 155 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 ELSPBP1Q96BH3 223 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 PHOX2BQ99453 314 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 SDF2Q99470 211 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 ZNF649Q9BS31 505 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 TRIM45Q9H8W5 580 aaPredicted RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 HINT3Q9NQE9 182 aaKnown RBP18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 NTMQ9P121 344 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 PCDHGB2Q9Y5G2 931 aa18.58■□□□□ 0.57
SCUBE1-201ENST00000290460 TMCC2O75069 709 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 NCR1O76036 304 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 KLF8O95600 359 aaPredicted RBP18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 CSF3P09919 207 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 CPMP14384 443 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 HTR3AP46098 478 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 TFF2Q03403 129 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 ARHGAP11BQ3KRB8 267 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 DDI2Q5TDH0 399 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 FCRL6Q6DN72 434 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 WDR88Q6ZMY6 472 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF517Q6ZMY9 492 aaPredicted RBP18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 CPOQ8IVL8 374 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 UBQLNLQ8IYU4 475 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 SIRT6Q8N6T7 355 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 TM4SF19Q96DZ7 209 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 SECISBP2Q96T21 854 aaKnown RBP18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 GABRG3Q99928 467 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 DPH1Q9BZG8 443 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 MMP28Q9H239 520 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 PHF11Q9UIL8 331 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 CBLCQ9ULV8 474 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF232Q9UNY5 417 aa18.58■□□□□ 0.56
SCUBE1-201ENST00000290460 ZC3H12DA2A288 527 aaKnown RBP18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 B3GALT2O43825 422 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 GSTT2P0CG29 244 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 GSTT2BP0CG30 244 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 PVRP15151 417 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 HTR2AP28223 471 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 ATP6V1E1P36543 226 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 EEF1A1P68104 462 aaKnown RBP18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 NFATC4Q14934 902 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 UBE2J2Q8N2K1 259 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 OR2T33Q8NG76 320 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 PATE1Q8WXA2 126 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 NACC2Q96BF6 587 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 SERINC2Q96SA4 455 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 ENKD1Q9H0I2 346 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 MED20Q9H944 212 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 COMMD3Q9UBI1 195 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 CDH10Q9Y6N8 788 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 GON4LQ3T8J9 2241 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 TRIOO75962 3097 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 SHISA3A0PJX4 238 aa18.57■□□□□ 0.56
SCUBE1-201ENST00000290460 LRRC72A6NJI9 287 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms