RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 INMT-MINDY4F8WBC2 141 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 GTPBP1O00178 669 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 PAHP00439 452 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SOD1P00441 154 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 FBXW4P57775 412 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MLLT11Q13015 90 aaPredicted RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ZNF267Q14586 743 aaPredicted RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ABHD17CQ6PCB6 329 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 GPA33Q99795 319 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 APOOQ9BUR5 198 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 RAB11FIP5Q9BXF6 653 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ACTRT3Q9BYD9 372 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 KCNN2Q9H2S1 579 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 HCN3Q9P1Z3 774 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 GNG8Q9UK08 70 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 EXOSC1Q9Y3B2 195 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ZNF670-ZNF695F2Z2N8 137 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 PPP1R3DO95685 299 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 REEP5Q00765 189 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 RPE65Q16518 533 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 PUS10Q3MIT2 529 aaKnown RBP14.88□□□□□ -0.03
SMAD6-201ENST00000288840 RPTNQ6XPR3 784 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 NANOGP1Q8N7R0 232 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 BEST4Q8NFU0 473 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 TMEM163Q8TC26 289 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 TM9SF4Q92544 642 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 MS4A6EQ96DS6 147 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 CDCA4Q9BXL8 241 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 A4GNTQ9UNA3 340 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 A8MVJ9 347 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 NDUFB5O43674 189 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ORC5O43913 435 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 CISD3P0C7P0 127 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 DRD5P21918 477 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ACSL1P33121 698 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ITPRIPL2Q3MIP1 535 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 TP53I3Q53FA7 332 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 RTL4Q6ZR62 310 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 CRIPAKQ8N1N5 446 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 OR13C2Q8NGS9 318 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 NDC1Q9BTX1 674 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 RPP25Q9BUL9 199 aaKnown RBP14.88□□□□□ -0.03
SMAD6-201ENST00000288840 CCDC32Q9BV29 185 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 OR52D1Q9H346 318 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ACSS1Q9NUB1 689 aaPredicted RBP14.88□□□□□ -0.03
SMAD6-201ENST00000288840 TBC1D29Q9UFV1 150 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 LILRB3O75022 631 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 STX11O75558 287 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ACVR2AP27037 513 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 SLC1A3P43003 542 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 HCCSP53701 268 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 TMEM35AQ53FP2 167 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 RNF165Q6ZSG1 346 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 PCNPQ8WW12 178 aaKnown RBP14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ELP4Q96EB1 424 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 ALG8Q9BVK2 526 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
SMAD6-201ENST00000288840 UNC80Q8N2C7 3258 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SGK494L7N484 410 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 PCBP3P57721 371 aaKnown RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 PDE7AQ13946 482 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ARHGAP19Q14CB8 494 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 FAM109BQ6ICB4 259 aaPredicted RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 LINGO2Q7L985 606 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 CAMKMTQ7Z624 323 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 OR52E2Q8NGJ4 325 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 PEX12O00623 359 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SMAD9O15198 467 aaKnown RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 YES1P07947 543 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 FABP5Q01469 135 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 BTBD16Q32M84 506 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 FIGLAQ6QHK4 219 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SERPINA12Q8IW75 414 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 GJD3Q8N144 294 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 TRIM36Q9NQ86 728 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SIRT3Q9NTG7 399 aaPredicted RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 MRPL39Q9NYK5 338 aaKnown RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ITGB1BP2Q9UKP3 347 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 LOC105369274A0A096LPK9 316 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 UNC119BA6NIH7 251 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ACP2P11117 423 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SHC1P29353 583 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 P2RY14Q15391 338 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 TATDN3Q17R31 274 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ABI3BPQ7Z7G0 1075 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 OR4N4Q8N0Y3 316 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ZNF655Q8N720 491 aaPredicted RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 SDR9C7Q8NEX9 313 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 PMEPA1Q969W9 287 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 ZNF559Q9BR84 538 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 PINK1Q9BXM7 581 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 APOBEC3BQ9UH17 382 aaKnown RBP14.87□□□□□ -0.03
SMAD6-201ENST00000288840 LIPT1Q9Y234 373 aa14.87□□□□□ -0.03
SMAD6-201ENST00000288840 GABRPO00591 440 aa14.86□□□□□ -0.03
SMAD6-201ENST00000288840 PAPLNO95428 1278 aa14.86□□□□□ -0.03
SMAD6-201ENST00000288840 DHFRP00374 187 aa14.86□□□□□ -0.03
SMAD6-201ENST00000288840 IFNGP01579 166 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms