RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 EFNB1P98172 346 aa17.92■□□□□ 0.46
BRAF-201ENST00000288602 DBPQ10586 325 aaPredicted RBP17.92■□□□□ 0.46
BRAF-201ENST00000288602 WDR88Q6ZMY6 472 aa17.92■□□□□ 0.46
BRAF-201ENST00000288602 RBM12BQ8IXT5 1001 aaKnown RBP17.92■□□□□ 0.46
BRAF-201ENST00000288602 VMP1Q96GC9 406 aa17.92■□□□□ 0.46
BRAF-201ENST00000288602 OPALINQ96PE5 141 aa17.92■□□□□ 0.46
BRAF-201ENST00000288602 DUSP22Q9NRW4 184 aa17.92■□□□□ 0.46
BRAF-201ENST00000288602 A0A0C4DFX4 3053 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 CSTF2P33240 577 aaKnown RBP eCLIP17.91■□□□□ 0.461e-6■■■□□ 18.9
BRAF-201ENST00000288602 IFNGR2P38484 337 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 CAPZBP47756 277 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 SERPINB10P48595 397 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 ATP1A4Q13733 1029 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 SHFQ7M4L6 423 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 OR6Q1Q8NGQ2 317 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 FGF11Q92914 225 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 ERGIC3Q9Y282 383 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 DTX4Q9Y2E6 619 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 TMEM131Q92545 1883 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 VPS13AQ96RL7 3174 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 WWP2O00308 870 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 KPNA4O00629 521 aaPredicted RBP17.91■□□□□ 0.46
BRAF-201ENST00000288602 POU6F2P78424 691 aaPredicted RBP17.91■□□□□ 0.46
BRAF-201ENST00000288602 DECR1Q16698 335 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 EXOSC6Q5RKV6 272 aaKnown RBP17.91■□□□□ 0.46
BRAF-201ENST00000288602 ATCAYQ86WG3 371 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 GJD3Q8N144 294 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 OR4Q3Q8NH05 313 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 MCFD2Q8NI22 146 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 UCKL1Q9NWZ5 548 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 PCDHGA3Q9Y5H0 932 aa17.91■□□□□ 0.46
BRAF-201ENST00000288602 SYNDIG1LA6NDD5 238 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 DSCR3O14972 297 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 HBQ1P09105 142 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 SLC35E2P0CK97 266 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 FASLGP48023 281 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PLAURQ03405 335 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 STX4Q12846 297 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 NCF4Q15080 339 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 SMAD2Q15796 467 aaKnown RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 INAQ16352 499 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 NNATQ16517 81 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PRTGQ2VWP7 1150 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 COL13A1Q5TAT6 717 aaPredicted RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 MBOAT2Q6ZWT7 520 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 OR52I1Q8NGK6 324 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PFN4Q8NHR9 129 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 HSPA12BQ96MM6 686 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 SOHLH2Q9NX45 425 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 LSM2Q9Y333 95 aaKnown RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 TMEM184BQ9Y519 407 aaPredicted RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 IGHV5-51A0A0C4DH38 117 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 CCRL2O00421 344 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 KIAA0513O60268 411 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 OR5F1O95221 314 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 DBIP07108 87 aaKnown RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 NID1P14543 1247 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 MAOAP21397 527 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 MAP3K8P41279 467 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PSMD7P51665 324 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PSG6Q00889 435 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 ZNF846Q147U1 533 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 MEDAGQ5VYS4 303 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 RASSF6Q6ZTQ3 369 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 GKN2Q86XP6 184 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 STACQ99469 402 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 PRSS27Q9BQR3 290 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 C6orf62Q9GZU0 229 aaPredicted RBP17.9■□□□□ 0.46
BRAF-201ENST00000288602 HHATLQ9HCP6 504 aa17.9■□□□□ 0.46
BRAF-201ENST00000288602 CDHR4A6H8M9 788 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 PRKNO60260 465 aaPredicted RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 BRINP1O60477 761 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 KCNK2O95069 426 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 SLC2A10O95528 541 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 THBS1P07996 1170 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 IMPDH2P12268 514 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 IL9P15248 144 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 S1PR1P21453 382 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 RPS4Y1P22090 263 aaKnown RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 NUDT1P36639 197 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 ETV5P41161 510 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 CSNK1EP49674 416 aaKnown RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 ETV1P50549 477 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 KCNAB1Q14722 419 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 SPHARQ15513 63 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 OR1Q1Q15612 314 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 USP43Q70EL4 1123 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 TMEM163Q8TC26 289 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 RIT1Q92963 219 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 RBM18Q96H35 190 aaKnown RBP17.89■□□□□ 0.45
BRAF-201ENST00000288602 DPH1Q9BZG8 443 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 ATP13A2Q9NQ11 1180 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 C20orf141Q9NUB4 165 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 SATB2Q9UPW6 733 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 DMDP11532 3685 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 ASXL3Q9C0F0 2248 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 PNMA8CA0A1B0GUJ8 204 aa17.89■□□□□ 0.45
BRAF-201ENST00000288602 EIPR1Q53HC9 387 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms