RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RNF170Q96K19 258 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 MS4A4EQ96PG1 132 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 TTYH3Q9C0H2 523 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 LIN28AQ9H9Z2 209 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ATXN7L1Q9ULK2 861 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 TNFSF12O43508 249 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IL13RA1P78552 427 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NAPRTQ6XQN6 538 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF783Q6ZMS7 281 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 FAM212BQ9NTI7 297 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 HS3ST4Q9Y661 456 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 LMO7Q8WWI1 1683 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 CDHR4A6H8M9 788 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF860A6NHJ4 632 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SCAMP2O15127 329 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PCBD1P61457 104 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 RPS26P62854 115 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IL26Q9NPH9 171 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PIGVQ9NUD9 493 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRELID3BQ9Y3B1 194 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 OARD1Q9Y530 152 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 YIPF1Q9Y548 306 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 RPS10-NUDT3A0A1W2PQS6 291 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 BTBD17A6NE02 478 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 HBE1P02100 147 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ARSBP15848 533 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 POLR2CP19387 275 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 CRABP1P29762 137 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 RPS10P46783 165 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 F2RL1P55085 397 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SNRPD2P62316 118 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MFGE8Q08431 387 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PPP1R8Q12972 351 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PTPRCAPQ14761 206 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PKDCCQ504Y2 493 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NDNFQ8TB73 568 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GAB3Q8WWW8 586 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 A0A1W2PQL4 384 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ARAFP10398 606 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MYF6P23409 242 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PKLRP30613 574 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 AKR1C1Q04828 323 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF648Q5T619 568 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM71Q6P5X7 295 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 CRTC1Q6UUV9 634 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 GDPGP1Q6ZNW5 385 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NOXA1Q86UR1 476 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MUS81Q96NY9 551 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 OR52A5Q9H2C5 316 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SUSD2Q9UGT4 822 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ARPC1BO15143 372 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MRPS14O60783 128 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SNRNP70P08621 437 aaKnown RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 KDELR2P33947 212 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ETV5P41161 510 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PCLAFQ15004 111 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SFRP4Q6FHJ7 346 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 HEPHL1Q6MZM0 1159 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SUSD1Q6UWL2 747 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 LARP4Q71RC2 724 aaKnown RBP eCLIP8.28□□□□□ -1.084e-10■■■□□ 16.3
NIPBL-201ENST00000282516 OR4K1Q8NGD4 311 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 WDR92Q96MX6 357 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 UHRF1Q96T88 793 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TYRP14679 529 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 LMO2P25791 158 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 STK19P49842 368 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TLE4Q04727 773 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SBSNQ6UWP8 590 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TIFABQ6ZNK6 161 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 KANSL1Q7Z3B3 1105 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 OR14L1PQ8NHC6 308 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ELP4Q96EB1 424 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 CWH43Q9H720 699 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 FABP1P07148 127 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ELNP15502 786 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PAX6P26367 422 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 HOXA1P49639 335 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 OR52W1Q6IF63 320 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MOB1BQ7L9L4 216 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 DIO2Q92813 273 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ST6GALNAC5Q9BVH7 336 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 BCO2Q9BYV7 579 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-201ENST00000282516 LCATP04180 440 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF28P17035 718 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 NDUFA6P56556 154 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 PLA2G7Q13093 441 aa8.28□□□□□ -1.08
NIPBL-201ENST00000282516 SFT2D3Q587I9 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms