RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 OR10H2O60403 315 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PRAF2O60831 178 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ACTL6AO96019 429 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 EBLN1P0CF75 366 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 IFNGR1P15260 489 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 TNFRSF1BP20333 461 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PNLIPRP2P54317 469 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SNRPGP62308 76 aaKnown RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 NHLH2Q02577 135 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 KCNA10Q16322 511 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 KIAA1211LQ6NV74 962 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PTOV1Q86YD1 416 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 STK40Q8N2I9 435 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 C1QTNF3Q9BXJ4 246 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 MFFQ9GZY8 342 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ABCG8Q9H221 673 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CTPS2Q9NRF8 586 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 RBM22Q9NW64 420 aaKnown RBP eCLIP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 MARCH4Q9P2E8 410 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 A0A0G2JMZ2 1700 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 A0A1B0GUH1 482 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ANHXE9PGG2 379 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 TLR4O00206 839 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SLC25A12O75746 678 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 INSRRP14616 1297 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 NME1P15531 152 aaKnown RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 LHX1P48742 406 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 WNT4P56705 351 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PKIAP61925 76 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 LSM6P62312 80 aaKnown RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PITX1P78337 314 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 DGCR2P98153 550 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 FOXO1Q12778 655 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CLN3Q13286 438 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 GAMTQ14353 236 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SURF2Q15527 256 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 PKDCCQ504Y2 493 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SLC35D3Q5M8T2 416 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SLC22A10Q63ZE4 541 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 METTL7BQ6UX53 244 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CEACAM20Q6UY09 585 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 MARCH9Q86YJ5 346 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CPXM2Q8N436 756 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ARIH2OSQ8N7S6 290 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 RTL3Q8N8U3 475 aaKnown RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF248Q8NDW4 579 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SPPL2AQ8TCT8 520 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ACOT12Q8WYK0 555 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SCLYQ96I15 445 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SLC2A13Q96QE2 648 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 OR1F2PQ96R84 312 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 TEAD3Q99594 435 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 IFT27Q9BW83 186 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CACYBPQ9HB71 228 aaKnown RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 FAM212BQ9NTI7 297 aaPredicted RBP8.65□□□□□ -1.02
PDGFC-201ENST00000274071 CCL27Q9Y4X3 112 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 OR51F1A6NGY5 319 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PSMD3O43242 534 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 HOXA2O43364 376 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 B4GALT3O60512 393 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 YIF1AO95070 293 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CD2P06729 351 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 HTR2AP28223 471 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ARL2P36404 184 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 RAB5CP51148 216 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ADPRHP54922 357 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 H2BFSP57053 126 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PPIAP62937 165 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 HTRA4P83105 476 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 BCL2L1Q07817 233 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ADGRF1Q5T601 910 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SDHAF4Q5VUM1 108 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 AFMIDQ63HM1 303 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 C18orf63Q68DL7 685 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CLEC9AQ6UXN8 241 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GLDNQ6ZMI3 551 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PDZD4Q76G19 769 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 KLHDC8BQ8IXV7 354 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 LRRC18Q8N456 261 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 OR52I1Q8NGK6 324 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ROBO4Q8WZ75 1007 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GPR20Q99678 358 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TMED9Q9BVK6 235 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 COLEC11Q9BWP8 271 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PINK1Q9BXM7 581 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SMOC1Q9H4F8 434 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PRDM5Q9NQX1 630 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 C19orf12Q9NSK7 152 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 DNAJB11Q9UBS4 358 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TRPV2Q9Y5S1 764 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 A0A1W2PRB8 838 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 HEPACAM2A8MVW5 462 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms