RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 KCNJ3P48549 501 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 RGS7BPQ6MZT1 257 aaPredicted RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 ZNF433Q8N7K0 673 aaPredicted RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 CXorf36Q9H7Y0 433 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TMEM138Q9NPI0 162 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 ZSCAN32Q9NX65 697 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 C7orf66A4D0T2 115 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TRABD2BA6NFA1 517 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 PRSS44E7EML9 344 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 GPR31O00270 319 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 CHST10O43529 356 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SLC19A2O60779 497 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 KHDRBS3O75525 346 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 OAZ2O95190 189 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 ACP2P11117 423 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 CR2P20023 1033 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 ACADLP28330 430 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TAP2Q03519 686 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 NPAS4Q8IUM7 802 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 KLHL36Q8N4N3 616 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 LRIG1Q96JA1 1093 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 NRTNQ99748 197 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SARGQ9BW04 601 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TINAGL1Q9GZM7 467 aaPredicted RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 ESRP2Q9H6T0 727 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 WDR26Q9H7D7 661 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SLC39A1Q9NY26 324 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 AK6Q9Y3D8 172 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 H7C4K7 107 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 J3QLW9 94 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SGCEO43556 437 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TBL1XO60907 577 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SOX30O94993 753 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 RPLP2P05387 115 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 NR2F1P10589 423 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 ZNF19P17023 458 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 RBMS2Q15434 407 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 NHLRC3Q5JS37 347 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 HIST2H2AA3Q6FI13 130 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 OXR1Q8N573 874 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 SLC6A16Q9GZN6 736 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 REEP4Q9H6H4 257 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 GLOD5A6NK44 160 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 DRGXA6NNA5 263 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 KRBOX1C9JBD0 128 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 KDELR3O43731 214 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 SDC3O75056 442 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 RP2O75695 350 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 ADRB1P08588 477 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 FUT1P19526 365 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 ACHEP22303 614 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 IRS1P35568 1242 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 LIMS1P48059 325 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.48
HERC6-202ENST00000273960 TNFRSF17Q02223 184 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 SWI5Q1ZZU3 235 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 SFXN4Q6P4A7 337 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 LRRC70Q7Z2Q7 622 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.02□□□□□ -0.48
HERC6-202ENST00000273960 PDZD9Q8IXQ8 264 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 MYLIPQ8WY64 445 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 GAL3ST1Q99999 423 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 CRB3Q9BUF7 120 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 CYSLTR2Q9NS75 346 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 SDK1Q7Z5N4 2213 aa12.02□□□□□ -0.48
HERC6-202ENST00000273960 A0A1B0GVI7 797 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 F8W036 122 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 G3V3Q6 166 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 FKTNO75072 461 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 SLC16A8O95907 504 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 DRD2P14416 443 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 TIA1P31483 386 aaKnown RBP eCLIP12.02□□□□□ -0.49
HERC6-202ENST00000273960 NSG1P42857 185 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 MAGEB1P43366 347 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 E2F1Q01094 437 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 HLXQ14774 488 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 ZNF630Q2M218 657 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 PDSS1Q5T2R2 415 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 HAGHLQ6PII5 290 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 SLC36A4Q6YBV0 504 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 LRRC28Q86X40 367 aaPredicted RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 CPOQ8IVL8 374 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 BVESQ8NE79 360 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 OR5M1Q8NGP8 315 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 RELTQ969Z4 430 aa12.02□□□□□ -0.49
HERC6-202ENST00000273960 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
HERC6-202ENST00000273960 FUBP3Q96I24 572 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms