RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 GABRA3P34903 492 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 RGS8P57771 180 aaPredicted RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MAT1AQ00266 395 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 TRAM2Q15035 370 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 C1orf94Q6P1W5 598 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MFSD4AQ8N468 514 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 TOR1AIP2Q8NFQ8 470 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PIK3R3Q92569 461 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 RHNO1Q9BSD3 238 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 COPS4Q9BT78 406 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 LMF2Q9BU23 707 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 POLR2J2Q9GZM3 115 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 SLIRPQ9GZT3 109 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 EVA1AQ9H8M9 152 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PRMT8Q9NR22 394 aaPredicted RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MAN2C1Q9NTJ4 1040 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CUTCQ9NTM9 273 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 REV1Q9UBZ9 1251 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 FTSJ1Q9UET6 329 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 OSGIN1Q9UJX0 560 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PCDH15Q96QU1 1955 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 EFCAB9A8MZ26 197 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 H3BMH7 237 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 LAMTOR5O43504 91 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 TPST2O60704 377 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 GSTM3P21266 225 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 RPS4Y1P22090 263 aaKnown RBP14.23□□□□□ -0.13
SF3B4-201ENST00000271628 UGT2B10P36537 528 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 SEPHS1P49903 392 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 NCS1P62166 190 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 ALDH6A1Q02252 535 aaKnown RBP14.23□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF155Q12901 538 aaPredicted RBP14.23□□□□□ -0.13
SF3B4-201ENST00000271628 CBX3Q13185 183 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 SHBQ15464 509 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 TBCEQ15813 527 aaPredicted RBP14.23□□□□□ -0.13
SF3B4-201ENST00000271628 CCNJQ5T5M9 372 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 DGAT2L6Q6ZPD8 337 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 MED25Q71SY5 747 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 RRM2BQ7LG56 351 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 GPR135Q8IZ08 494 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 CLIP4Q8N3C7 705 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 D2HGDHQ8N465 521 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 MORN4Q8NDC4 146 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 OR4K5Q8NGD3 323 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 DOK4Q8TEW6 326 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 ZHX1-C8orf76Q96EF9 292 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 PSORS1C1Q9UIG5 152 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 PMF1-BGLAPU3KQ54 211 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 CACNA1IQ9P0X4 2223 aa14.23□□□□□ -0.13
SF3B4-201ENST00000271628 TMEM150CB9EJG8 249 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 KIAA0513O60268 411 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 BRINP1O60477 761 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 CDC123O75794 336 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 NID1P14543 1247 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 TGFBR2P37173 567 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 GSSP48637 474 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 EEF1A1P68104 462 aaKnown RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 BNC1Q01954 994 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 CFHR1Q03591 330 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 SYT16Q17RD7 645 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 ENTPD8Q5MY95 495 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF836Q6ZNA1 936 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 PRSS42Q7Z5A4 293 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 Q8N9G6 341 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 DIO2Q92813 273 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 SLC41A2Q96JW4 573 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 SERTAD3Q9UJW9 196 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 PILRBQ9UKJ0 227 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 GPR55Q9Y2T6 319 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 TTC36A6NLP5 189 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 CPSF4LA6NMK7 179 aaKnown RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 CLCA1A8K7I4 914 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 H3BN98 237 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 TOX3O15405 576 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 PRAMEF2O60811 474 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 OR5F1O95221 314 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 LCKP06239 509 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 BMP4P12644 408 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 GABRB1P18505 474 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 POU1F1P28069 291 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 EPHA8P29322 1005 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 EMDP50402 254 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 BTG2P78543 158 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 SIGLEC14Q08ET2 396 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 ERV3-1Q14264 604 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 KCNAB1Q14722 419 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 TTLL10Q6ZVT0 673 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 ZER1Q7Z7L7 766 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 RANBP3LQ86VV4 465 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 OR1F2PQ96R84 312 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 MCHR1Q99705 422 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 FOLH1BQ9HBA9 442 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 CTPS2Q9NRF8 586 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF226Q9NYT6 803 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 GMEB2Q9UKD1 530 aa14.22□□□□□ -0.13
SF3B4-201ENST00000271628 PAIP2BQ9ULR5 123 aaKnown RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 TMEM184BQ9Y519 407 aaPredicted RBP14.22□□□□□ -0.13
SF3B4-201ENST00000271628 A0A087WUU8 490 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 A0A1B0GTQ1 180 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms