RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 E9PI62 339 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 LATO43561 262 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 MOSPD3O75425 235 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 CFL1P23528 166 aaKnown RBP25.68■■□□□ 1.7
CBX4-201ENST00000269397 RGS8P57771 180 aaPredicted RBP25.68■■□□□ 1.7
CBX4-201ENST00000269397 ST8SIA6P61647 398 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 LILRA6Q6PI73 481 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 ZNF620Q6ZNG0 422 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 CXXC5Q7LFL8 322 aaKnown RBP25.68■■□□□ 1.7
CBX4-201ENST00000269397 ALG8Q9BVK2 526 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 ZFP64Q9NPA5 681 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.68■■□□□ 1.7
CBX4-201ENST00000269397 CACNG2Q9Y698 323 aa25.68■■□□□ 1.7
CBX4-201ENST00000269397 LOC105371267A0A1B0GV96 52 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ERI3O43414 337 aaKnown RBP25.67■■□□□ 1.7
CBX4-201ENST00000269397 REM1O75628 298 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ZIC2O95409 532 aaPredicted RBP25.67■■□□□ 1.7
CBX4-201ENST00000269397 PER3P56645 1201 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 C6orf132Q5T0Z8 1188 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 HBMQ6B0K9 141 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 LRRC28Q86X40 367 aaPredicted RBP25.67■■□□□ 1.7
CBX4-201ENST00000269397 SREK1IP1Q8N9Q2 155 aaPredicted RBP25.67■■□□□ 1.7
CBX4-201ENST00000269397 HCAR1Q9BXC0 346 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 UCKL1Q9NWZ5 548 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ING4Q9UNL4 249 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 LAG3P18627 525 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 HK1P19367 917 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 CLCNKAP51800 687 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 EPHA5P54756 1037 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ACSM1Q08AH1 577 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 GDF7Q7Z4P5 450 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 CACUL1Q86Y37 369 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 OR9A2Q8NGT5 310 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 NXPE3Q969Y0 559 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 MCHR1Q99705 422 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 TIMP4Q99727 224 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ARHGDIGQ99819 225 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.67■■□□□ 1.72e-7■■■□□ 16.2
CBX4-201ENST00000269397 PIGUQ9H490 435 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 KLHL1Q9NR64 748 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 ASB4Q9Y574 426 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 CDH23Q9H251 3354 aa25.67■■□□□ 1.7
CBX4-201ENST00000269397 CXCL14O95715 111 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 ERGP11308 486 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 DRD2P14416 443 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 FPR3P25089 353 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 PITPNBP48739 271 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SLC3A1Q07837 685 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SLC9A5Q14940 896 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 KLHL12Q53G59 568 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 OR2T33Q8NG76 320 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 ACOT11Q8WXI4 607 aaPredicted RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 VWCEQ96DN2 955 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 FAIM2Q9BWQ8 316 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 TEX12Q9BXU0 123 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 ENKD1Q9H0I2 346 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 C6orf106Q9H6K1 298 aaPredicted RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 BABAM2Q9NXR7 383 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SLCO1C1Q9NYB5 712 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SCN3AQ9NY46 2000 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 CD3GP09693 182 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 PAICSP22234 425 aaKnown RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 AHCYP23526 432 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 THBS2P35442 1172 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SLC16A1P53985 500 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 SRP54P61011 504 aaKnown RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 BTG1P62324 171 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 LTB4RQ15722 352 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 BEST4Q8NFU0 473 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 ING5Q8WYH8 240 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 ACOT12Q8WYK0 555 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 CCDC120Q96HB5 630 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 MS4A3Q96HJ5 214 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 TRAF4Q9BUZ4 470 aaPredicted RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 KCNN2Q9H2S1 579 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 B3GNT2Q9NY97 397 aa25.66■■□□□ 1.7
CBX4-201ENST00000269397 MRPS7Q9Y2R9 242 aaKnown RBP25.66■■□□□ 1.7
CBX4-201ENST00000269397 MRPL3P09001 348 aaKnown RBP25.65■■□□□ 1.7
CBX4-201ENST00000269397 ADRB3P13945 408 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 ENPP1P22413 925 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 GNA13Q14344 377 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 SLC25A35Q3KQZ1 300 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 MTFR2Q6P444 385 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 TEX261Q6UWH6 196 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 C16orf62Q7Z3J2 963 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 OR10H4Q8NGA5 316 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 COQ3Q9NZJ6 369 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 U3KQ87 197 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 ANTXRLA6NF34 631 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 SLC22A5O76082 557 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 FGF18O76093 207 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 DHFRP00374 187 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 STOMP27105 288 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 STAT5AP42229 794 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 MTNR1BP49286 362 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 PDX1P52945 283 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 E2F1Q01094 437 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 RPTNQ6XPR3 784 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 OAFQ86UD1 273 aa25.65■■□□□ 1.7
CBX4-201ENST00000269397 ACBD7Q8N6N7 88 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms