RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GNB5O14775 395 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 KLK8O60259 260 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 FMO6PO60774 539 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 B3GALT4O96024 378 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 STATHP02808 62 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 CD3GP09693 182 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 NDUFV2P19404 249 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR4P46093 362 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TAP2Q03519 686 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PON3Q15166 354 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 SEC23BQ15437 767 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 LPAL2Q16609 132 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 RAB12Q6IQ22 244 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 WASH2PQ6VEQ5 465 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEM184AQ6ZMB5 413 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TAF8Q7Z7C8 310 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEM17Q86X19 198 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF676Q8N7Q3 588 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 RIT1Q92963 219 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 KIAA1143Q96AT1 154 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM46AQ96IP4 442 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TMPRSS11EQ9UL52 423 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PPT2Q9UMR5 302 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 WDR45Q9Y484 360 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TRBV4-1A0A0J9YWV2 114 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 B4DXG7 233 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 RPP14O95059 124 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TFP02787 698 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 HTR1AP08908 422 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 NUDT1P36639 197 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 GZMKP49863 264 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 OR12D2P58182 307 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 STXBP1P61764 594 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 ZMYND11Q15326 602 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 FCN2Q15485 313 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PRAMEF17Q5VTA0 474 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 BAIAP2L2Q6UXY1 529 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PARGQ86W56 976 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 POMGNT2Q8NAT1 580 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TTLQ8NG68 377 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 SUN3Q8TAQ9 357 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 F2RL3Q96RI0 385 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 C17orf62Q9BQA9 187 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 CDCA4Q9BXL8 241 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC17A9Q9BYT1 436 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 KCNN3Q9UGI6 736 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 POLR1DQ9Y2S0 133 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 MED31Q9Y3C7 131 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 NUMA1Q14980 2115 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 UPK1AO00322 258 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PAK4O96013 591 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 VSX2P58304 361 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SKP1P63208 163 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 IFITM3Q01628 133 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 MAP4K2Q12851 820 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CLPPQ16740 277 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SWI5Q1ZZU3 235 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GGTA1PQ4G0N0 100 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 HENMT1Q5T8I9 393 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM122CQ6P4D5 195 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 KIAA0907Q7Z7F0 614 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 LRRC28Q86X40 367 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ETFBKMTQ8IXQ9 262 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SAMD14Q8IZD0 417 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 MS4A15Q8N5U1 240 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 DEFB119Q8N690 84 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 AVL9Q8NBF6 648 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 IL17FQ96PD4 163 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GABARAPL3Q9BY60 117 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC35C2Q9NQQ7 365 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TEX10Q9NXF1 929 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 CNIH4Q9P003 139 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 MUTYHQ9UIF7 546 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 DISC1C4P0D8 188 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM227AF5H4B4 570 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 H7BY64 318 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF780AO75290 641 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PRSS23O95084 383 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GLULP15104 373 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GABRA5P31644 462 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ELOAQ14241 798 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEM69Q5SWH9 247 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC44A3Q8N4M1 653 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 GRHL3Q8TE85 626 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 UBTD2Q8WUN7 234 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SPRYD4Q8WW59 207 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 ASB11Q8WXH4 323 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM3CQ92520 227 aa10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 RERGQ96A58 199 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC22A18Q96BI1 424 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms