RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 MC3RP41968 323 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 SIM1P81133 766 aaPredicted RBP18.07■□□□□ 0.48
UPF1-201ENST00000262803 MRPL21Q7Z2W9 205 aaKnown RBP18.07■□□□□ 0.48
UPF1-201ENST00000262803 ADGRG5Q8IZF4 528 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 SLC15A4Q8N697 577 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ASCC1Q8N9N2 400 aaKnown RBP18.07■□□□□ 0.48
UPF1-201ENST00000262803 DTD2Q96FN9 168 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 SLC6A7Q99884 636 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 VAPAQ9P0L0 249 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 MYH1P12882 1939 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 SYT7O43581 403 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 RAB3BP20337 219 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ADH7P40394 386 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 PPP5CP53041 499 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 EPHA4P54764 986 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ARG2P78540 354 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 CAMK2DQ13557 499 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 CMTM1Q8IZ96 169 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 PEX14O75381 377 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ETV6P41212 452 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 Q6ZSR6 202 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 DTX3Q8N9I9 347 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 CDC6Q99741 560 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 OR10A5Q9H207 317 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 OR10A2Q9H208 303 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ABCG5Q9H222 651 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 INPP5EQ9NRR6 644 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ANKRD12Q6UB98 2062 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 KIAA0355O15063 1070 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 IL1RNP18510 177 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 CD6P30203 668 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 P2RY2P41231 377 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 PKDCCQ504Y2 493 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 DOK4Q8TEW6 326 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ZNF285Q96NJ3 590 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 ZNF587Q96SQ5 575 aaPredicted RBP18.07■□□□□ 0.48
UPF1-201ENST00000262803 POT1Q9NUX5 634 aa18.07■□□□□ 0.48
UPF1-201ENST00000262803 BOKQ9UMX3 212 aaPredicted RBP18.07■□□□□ 0.48
UPF1-201ENST00000262803 NPIPB15A6NHN6 443 aaPredicted RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 CA3P07451 260 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 VEGFBP49765 207 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 DNAJC22Q8N4W6 341 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 DRAXINQ8NBI3 349 aaPredicted RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 ABHD11Q8NFV4 315 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 MTG2Q9H4K7 406 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 DMRT3Q9NQL9 472 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 NAV1Q8NEY1 1877 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 C17orf105B2RV13 164 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 TRAPPC6BQ86SZ2 158 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 VWA5B2Q8N398 1253 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 MDGA1Q8NFP4 955 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 OR7G3Q8NG95 312 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 TBC1D20Q96BZ9 403 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 OR5B12Q96R08 314 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 PHB2Q99623 299 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 HCAR1Q9BXC0 346 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 TPSD1Q9BZJ3 242 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 FZD3Q9NPG1 666 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 UBQLN2Q9UHD9 624 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 ADAM29Q9UKF5 820 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 APOFQ13790 326 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 OR4N5Q8IXE1 308 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 GIMAP5Q96F15 307 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 KLHL9Q9P2J3 617 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 TRIM64CA6NLI5 447 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 GFRA2O00451 464 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 RRADP55042 308 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 WDR5P61964 334 aaKnown RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 CDK5R2Q13319 367 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 ATXN7L3Q14CW9 347 aaPredicted RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 PROX2Q3B8N5 592 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 PRAMEF8Q5VWM4 474 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 PRAMEF7Q5VXH5 474 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 CPZQ66K79 652 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 SLC6A19Q695T7 634 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 OR9A2Q8NGT5 310 aa18.06■□□□□ 0.48
UPF1-201ENST00000262803 TREX2Q9BQ50 279 aaPredicted RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 TP63Q9H3D4 680 aaPredicted RBP18.06■□□□□ 0.48
UPF1-201ENST00000262803 TM4SF4P48230 202 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 S100A12P80511 92 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 AWAT2Q6E213 333 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 NADSYN1Q6IA69 706 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 FAM180BQ6P0A1 224 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 NIPAL3Q6P499 406 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
UPF1-201ENST00000262803 NCCRP1Q6ZVX7 275 aaPredicted RBP18.05■□□□□ 0.48
UPF1-201ENST00000262803 SLC35F2Q8IXU6 374 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 C3orf58Q8NDZ4 430 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 TXNDC15Q96J42 360 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 ACAD8Q9UKU7 415 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 PPP6CO00743 305 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 LCKP06239 509 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 TAP2Q03519 686 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 CD300LFQ8TDQ1 290 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 CWH43Q9H720 699 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 NXT1Q9UKK6 140 aaKnown RBP18.05■□□□□ 0.48
UPF1-201ENST00000262803 HEMK1Q9Y5R4 338 aaPredicted RBP18.05■□□□□ 0.48
UPF1-201ENST00000262803 EDIL3O43854 480 aa18.05■□□□□ 0.48
UPF1-201ENST00000262803 GLO1Q04760 184 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms