RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DESI1Q6ICB0 168 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 C16orf62Q7Z3J2 963 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 FAM117AQ9C073 453 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 FCMRO60667 390 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 GCM2O75603 506 aaPredicted RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 INHBBP09529 407 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 HLA-DQA1Q5Y7H0 255 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 TCTN3Q6NUS6 607 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 ZCCHC12Q6PEW1 402 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 SLC7A5P1Q8MH63 180 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 C11orf65Q8NCR3 313 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 HIPK4Q8NE63 616 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 TRUB1Q8WWH5 349 aaKnown RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 DCBLD2Q96PD2 775 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 QRSL1Q9H0R6 528 aaKnown RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 TMEM38AQ9H6F2 299 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 MOV10Q9HCE1 1003 aaKnown RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 A4GALTQ9NPC4 353 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 DUSP22Q9NRW4 184 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 OR10H1Q9Y4A9 318 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 ARPC2O15144 300 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 GSTA4O15217 222 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 H6PDO95479 791 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 HTR1EP28566 365 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 PPICP45877 212 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 ZNF441Q8N8Z8 693 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 TSPAN14Q8NG11 270 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 SNIP1Q8TAD8 396 aaKnown RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 ZNF420Q8TAQ5 688 aaPredicted RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 M1APQ8TC57 530 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 LCORQ96JN0 433 aaPredicted RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 STACQ99469 402 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 DEFB126Q9BYW3 111 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 MMP25Q9NPA2 562 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 P2RX2Q9UBL9 471 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 SUCOQ9UBS9 1254 aaKnown RBP25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 AP4B1Q9Y6B7 739 aa25.38■■□□□ 1.65
SMARCD3-201ENST00000262188 NPIPA5A0A0B4J1W7 369 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 OR6C76A6NM76 312 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 NPIPA7E9PJI5 369 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 ASNA1O43681 348 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 NPIPA8P0DM63 369 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 ATP6V1B2P21281 511 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 TTKP33981 857 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 RNF144AP50876 292 aaPredicted RBP25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 CCNIQ14094 377 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 TRIM25Q14258 630 aaKnown RBP25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 DCAF10Q5QP82 559 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 DCST2Q5T1A1 773 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 SLC26A7Q8TE54 656 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 EFHD1Q9BUP0 239 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 CFL2Q9Y281 166 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 AP3M1Q9Y2T2 418 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 MED13Q9UHV7 2174 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 ACACAQ13085 2346 aa25.37■■□□□ 1.65
SMARCD3-201ENST00000262188 ARGFXA6NJG6 315 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 DUXAA6NLW8 204 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 CXCR6O00574 342 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 ACOT8O14734 319 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 RGS13O14921 159 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 SLC22A1O15245 554 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 KCNK2O95069 426 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 GGT1P19440 569 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 EIF2S3P41091 472 aaKnown RBP25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 POU6F2P78424 691 aaPredicted RBP25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 ATAD3BQ5T9A4 648 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 GLYATQ6IB77 296 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 HEPHL1Q6MZM0 1159 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 SIRT6Q8N6T7 355 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 OR10Q1Q8NGQ4 319 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 PYDC1Q8WXC3 89 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 ZG16BQ96DA0 208 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 RABL2AQ9UBK7 228 aaPredicted RBP25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 MKLN1Q9UL63 735 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 NOTOA8MTQ0 251 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 C1QTNF9BB2RNN3 333 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 ZFAND5O76080 213 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 CAPNS1P04632 268 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 C1QTNF9P0C862 333 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 PCGF2P35227 344 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 MRPS22P82650 360 aaKnown RBP25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 CHRNEQ04844 493 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 KCNJ8Q15842 424 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 B3GNTL1Q67FW5 361 aaPredicted RBP25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 BCORP1Q8N888 145 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 TMBIM1Q969X1 311 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 SDF2Q99470 211 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 BTBD2Q9BX70 525 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 Q9N2J8 555 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 EXD2Q9NVH0 621 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 CBLCQ9ULV8 474 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 ERGIC3Q9Y282 383 aa25.36■■□□□ 1.65
SMARCD3-201ENST00000262188 OPN1SWP03999 348 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 IGF2RP11717 2491 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 ANXA11P50995 505 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 CRYBA2P53672 197 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 LRRC36Q1X8D7 754 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 SPPL2CQ8IUH8 684 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 BRIX1Q8TDN6 353 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 ASB9Q96DX5 294 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms