RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LRRC32Q14392 662 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 MFSD13AQ14CX5 517 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 OCLNQ16625 522 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 SLC48A1Q6P1K1 146 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF680Q8NEM1 530 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 PROKR2Q8NFJ6 384 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 NELL2Q99435 816 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 APOOQ9BUR5 198 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 FGF22Q9HCT0 170 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 CTPS2Q9NRF8 586 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 TVP23BQ9NYZ1 205 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 PLRG1O43660 514 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 RNGTTO60942 597 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF250P15622 560 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 BUD31P41223 144 aaPredicted RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 PPP3R1P63098 170 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 LSM14AQ8ND56 463 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 MSANTD3Q96H12 275 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 PRRC1Q96M27 445 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 MYADMQ96S97 322 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 RPP25Q9BUL9 199 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 SPATA5L1Q9BVQ7 753 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 IGFLR1Q9H665 355 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 ING4Q9UNL4 249 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 RPL36Q9Y3U8 105 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 K7EQS6 105 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 TALDO1P37837 337 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF425Q6IV72 752 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 TMEM65Q6PI78 240 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 HDDC2Q7Z4H3 204 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ABI3BPQ7Z7G0 1075 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 KIF18BQ86Y91 864 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 MFSD9Q8NBP5 474 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF431Q8TF32 576 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 FAM131CQ96AQ9 280 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 PPP1R3EQ9H7J1 279 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 MRPL39Q9NYK5 338 aaKnown RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 FBXO9Q9UK97 447 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ENTPD4Q9Y227 616 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 INMT-MINDY4F8WBC2 141 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 FABP7O15540 132 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 KCNJ13O60928 360 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 EN2P19622 333 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 IL32P24001 234 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 COX10Q12887 443 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF267Q14586 743 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ITPRIPL2Q3MIP1 535 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 ACSM5Q6NUN0 579 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 C1orf94Q6P1W5 598 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 BHLHB9Q6PI77 547 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 PARM1Q6UWI2 310 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 CDH24Q86UP0 819 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 OR56A1Q8NGH5 318 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 FGF11Q92914 225 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 FGF14Q92915 247 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 TMEM203Q969S6 136 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 KCTD7Q96MP8 289 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 TRMT61BQ9BVS5 477 aaKnown RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 POLDIP3Q9BY77 421 aaKnown RBP21.12■□□□□ 0.97
MCF2L-201ENST00000261963 RERGLQ9H628 205 aa21.12■□□□□ 0.97
MCF2L-201ENST00000261963 A0A0G2JPF8 293 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 HNRNPCL2B2RXH8 293 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 HNRNPCL3B7ZW38 293 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 TLX2O43763 284 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 PLOD3O60568 738 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 HNRNPCL4P0DMR1 293 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 CSNK2A2P19784 350 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 INPP1P49441 399 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 GINS1Q14691 196 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 SF3A2Q15428 464 aaKnown RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 PAQR6Q6TCH4 344 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 NUDT18Q6ZVK8 323 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 GALNT11Q8NCW6 608 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 LHFPL5Q8TAF8 219 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 SCARF2Q96GP6 870 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF681Q96N22 645 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 MED18Q9BUE0 208 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 PRR14Q9BWN1 585 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 COMMD3Q9UBI1 195 aa21.11■□□□□ 0.97
MCF2L-201ENST00000261963 YBX2Q9Y2T7 364 aaKnown RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 MDC1Q14676 2089 aaKnown RBP21.11■□□□□ 0.97
MCF2L-201ENST00000261963 LOC102723532A0A0G2JNH3 316 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 SMIM30A4D0T7 59 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 EML2O95834 649 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 MC3RP41968 323 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 GIPRP48546 466 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ANXA11P50995 505 aaKnown RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ARFIP1P53367 373 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ADPRHP54922 357 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 SNRPNP63162 240 aaKnown RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 IKZF1Q13422 519 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 C9orf50Q5SZB4 431 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 CNIH2Q6PI25 160 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 GHDCQ8N2G8 530 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 FAM26EQ8N5C1 309 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 OR9A2Q8NGT5 310 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ZG16BQ96DA0 208 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 OR7D2Q96RA2 312 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 PINK1Q9BXM7 581 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 SLC38A1Q9H2H9 487 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms