RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 A0A1W2PS29 197 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FAM171A2A8MVW0 826 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 NPC1O15118 1278 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 B3GALT2O43825 422 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PIPP12273 146 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ARSBP15848 533 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GABRB1P18505 474 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 DDX6P26196 483 aaKnown RBP eCLIP4.44□□□□□ -1.7
USP44-201ENST00000258499 AK4P27144 223 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SSTR2P30874 369 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 BSGP35613 385 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 DDOSTP39656 456 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ETV6P41212 452 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 P2RY2P41231 377 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RPS5P46782 204 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SOX2P48431 317 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PGDP52209 483 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 HMGA2P52926 109 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 IFITM2Q01629 132 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 MESP2Q0VG99 397 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FAPQ12884 760 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 HYAL2Q12891 473 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 TSPAN31Q12999 210 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GPR50Q13585 617 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PDE7AQ13946 482 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 IRF3Q14653 427 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNF79Q15937 498 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 TMEM44Q2T9K0 475 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PGGHGQ32M88 737 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 MINDY4Q4G0A6 757 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FLYWCH1Q4VC44 716 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 C1QTNF12Q5T7M4 302 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SFRP4Q6FHJ7 346 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SFTPA1Q8IWL2 248 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SLC44A3Q8N4M1 653 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR4K14Q8NGD5 310 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR52E1Q8NGJ3 308 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR4K13Q8NH42 304 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR8K3Q8NH51 312 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 TRMT10AQ8TBZ6 339 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ACOT11Q8WXI4 607 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 OTUB2Q96DC9 234 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZMYND19Q96E35 227 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ST6GAL2Q96JF0 529 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GPA33Q99795 319 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 THAP7Q9BT49 309 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 TMEM106CQ9BVX2 250 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 BTBD2Q9BX70 525 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 C1QTNF7Q9BXJ2 289 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PINK1Q9BXM7 581 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZBP1Q9H171 429 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 OR52D1Q9H346 318 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 PELI2Q9HAT8 420 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ACSS1Q9NUB1 689 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ACSL5Q9ULC5 683 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 MGAT4AQ9UM21 535 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GPR34Q9UPC5 381 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 INSL6Q9Y581 213 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 COLEC10Q9Y6Z7 277 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 A0A1W2PQU0 124 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 A0A1W2PR48 441 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 URADA6NGE7 173 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 UNC119BA6NIH7 251 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SMAD9O15198 467 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 MAGEB4O15481 346 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 DPM1O60762 260 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 LDB3O75112 727 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RGS9O75916 674 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 SOX30O94993 753 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RCBTB2O95199 551 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ADRA2AP08913 450 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNF3P17036 446 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 HOXB9P17482 250 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 EDNRAP25101 427 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ACVR2AP27037 513 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GIFP27352 417 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GABRA3P34903 492 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 BCL6P41182 706 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RFX2P48378 723 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SRP9P49458 86 aaKnown RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 PDX1P52945 283 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNF267Q14586 743 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 ZNHIT3Q15649 155 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 OCLNQ16625 522 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 NDUFAF6Q330K2 333 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 TP53I3Q53FA7 332 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RPTNQ6XPR3 784 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 RTL4Q6ZR62 310 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 NRROSQ86YC3 692 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 SERPINA12Q8IW75 414 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 GATSQ8NAP1 163 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 FBXO15Q8NCQ5 510 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 C1orf216Q8TAB5 229 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 HMGB4Q8WW32 186 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ERMAPQ96PL5 475 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 DPCDQ9BVM2 203 aaPredicted RBP4.44□□□□□ -1.7
USP44-201ENST00000258499 CHST8Q9H2A9 424 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 ATP13A2Q9NQ11 1180 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms