RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SLC29A1Q99808 456 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ALG8Q9BVK2 526 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 J3KTA2 159 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 LIPCP11150 499 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 CD53P19397 219 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 DNASE1P24855 282 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF616Q08AN1 781 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 TUBB3Q13509 450 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 MCATQ8IVS2 390 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 OR9A4Q8NGU2 314 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC6A16Q9GZN6 736 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 MAB21L2Q9Y586 359 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 GRXCR2A6NFK2 248 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 DDCP20711 480 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 THBS2P35442 1172 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 CTSL3PQ5NE16 218 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF440Q8IYI8 595 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ITFG2Q969R8 447 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 MS4A4AQ96JQ5 239 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC39A1Q9NY26 324 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 PRRC2BQ5JSZ5 2229 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 HLCSP50747 726 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 EEF1A1P68104 462 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 RTP4Q96DX8 246 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 PAQR5Q9NXK6 330 aaPredicted RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 A0A1W2PQL4 384 aaPredicted RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 UGT2B10P36537 528 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF140P52738 457 aaPredicted RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 MRPL43Q8N983 215 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 FKBP10Q96AY3 582 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 CREB3L1Q96BA8 519 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 MAELQ96JY0 434 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC6A17Q9H1V8 727 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 DNMT3BQ9UBC3 853 aaKnown RBP17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ADAMTS5Q9UNA0 930 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 HSD17B1P14061 328 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF28P17035 718 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 NADSYN1Q6IA69 706 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 DPPA4Q7L190 304 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC30A3Q99726 388 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 ZDHHC7Q9NXF8 308 aa17.62■□□□□ 0.41
SMARCC1-201ENST00000254480 TMEM184AQ6ZMB5 413 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 FAM230AA0A1W2PPH8 454 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 DIRAS3O95661 229 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 ERCC1P07992 297 aaPredicted RBP17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 ZP2Q05996 745 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 DCST2Q5T1A1 773 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 CYS1Q717R9 158 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 THRSPQ92748 146 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 SOBPA7XYQ1 873 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 MPIG6BO95866 241 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 HACD2Q6Y1H2 254 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF160Q9HCG1 818 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 RHBDD3Q9Y3P4 386 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 ADAP00813 363 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 EDN3P14138 238 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 MYOGP15173 224 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 RGS6P49758 472 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 PPA1Q15181 289 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 LYSMD4Q5XG99 296 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 PIWIL3Q7Z3Z3 882 aaKnown RBP17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 CDH20Q9HBT6 801 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 LRIT1Q9P2V4 623 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 CHRNEQ04844 493 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 RNASE10Q5GAN6 216 aaKnown RBP17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 OR9K2Q8NGE7 335 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 OR13J1Q8NGT2 312 aa17.61■□□□□ 0.41
SMARCC1-201ENST00000254480 TRBV11-1A0A0K0K1C0 115 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 GOSR2O14653 212 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 DCTP40126 519 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 RPS5P46782 204 aaKnown RBP17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CSNK2A1P68400 391 aaPredicted RBP17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 USF2Q15853 346 aaPredicted RBP17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CSNK2A3Q8NEV1 391 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CPNE7Q9UBL6 633 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 NDUFB2O95178 105 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 IFNA2P01563 188 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 ERVFC1P60507 584 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CNEP1R1Q8N9A8 125 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF480Q8WV37 535 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 TMEM239Q8WW34 195 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 SDR39U1Q9NRG7 319 aaPredicted RBP17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 SLAMF8Q9P0V8 285 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 FBP2O00757 339 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 JRKO75564 520 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 FTMTQ8N4E7 242 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 EID2Q8N6I1 236 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 POTEKPQ9BYX7 375 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 C1SP09871 688 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 UBL4AP11441 157 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 ENDOUP21128 410 aaKnown RBP17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 GDF1P27539 372 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 SUOXP51687 545 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CDRT4Q8N9R6 151 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 GLYATL2Q8WU03 294 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 SULT2B1O00204 365 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 ONECUT3O60422 494 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms