RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 NATD1Q8N6N6 113 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 DOK4Q8TEW6 326 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 TMEM255BQ8WV15 326 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 RASSF5Q8WWW0 418 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 BADQ92934 168 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 RNF170Q96K19 258 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 ARHGAP9Q9BRR9 750 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 SLC22A4Q9H015 551 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 FGF20Q9NP95 211 aaPredicted RBP9.46□□□□□ -0.9
COPB1-201ENST00000249923 PCDHGB2Q9Y5G2 931 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 C2orf92A0A1B0GVN3 265 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SMAD9O15198 467 aaKnown RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 PRODHO43272 600 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PROM1O43490 865 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PCDH8O95206 1070 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 IL1AP01583 271 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 ZGLP1P0C6A0 271 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 KHKP50053 298 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 TRA2BP62995 288 aaKnown RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 TPBGQ13641 420 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PLK5Q496M5 336 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 AADACL4Q5VUY2 407 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 VITQ6UXI7 678 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 WDR88Q6ZMY6 472 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 VN1R4Q7Z5H5 301 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 ELP4Q96EB1 424 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 MAP6Q96JE9 813 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 WDR26Q9H7D7 661 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 C12orf4Q9NQ89 552 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 ING3Q9NXR8 418 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 MRPL15Q9P015 296 aaKnown RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 SLC13A4Q9UKG4 626 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 TMEM129A0AVI4 362 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 ZC3H12DA2A288 527 aaKnown RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 GJA4P35212 333 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PTGS2P35354 604 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 GPR4P46093 362 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 AVPR1BP47901 424 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 GPAT3Q53EU6 434 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 EOGTQ5NDL2 527 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 IL20RBQ6UXL0 311 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 RTL10Q7L3V2 364 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SIRT6Q8N6T7 355 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 OR7G2Q8NG99 324 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 OR2L8Q8NGY9 312 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 GRPEL2Q8TAA5 225 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SUSD6Q92537 303 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SLC35A4Q96G79 324 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 QRFPRQ96P65 431 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 SOSTQ9BQB4 213 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 PCBD2Q9H0N5 130 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 NDRG2Q9UN36 371 aaKnown RBP9.45□□□□□ -0.9
COPB1-201ENST00000249923 DMDP11532 3685 aa9.45□□□□□ -0.9
COPB1-201ENST00000249923 LOC105369274A0A096LPK9 316 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PRR23AA6NEV1 266 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 STK25O00506 426 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 RGS13O14921 159 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SURF4O15260 269 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 NFATC1O95644 943 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 FGBP02675 491 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 KIR2DL3P43628 341 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 MTNR1AP48039 350 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 AKR1D1P51857 326 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SLC9A5Q14940 896 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CDK10Q15131 360 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CST6Q15828 149 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 TATDN3Q17R31 274 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 MINDY4Q4G0A6 757 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ZNF311Q5JNZ3 666 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ZNF730Q6ZMV8 503 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 FRRS1Q6ZNA5 592 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 OR4N4Q8N0Y3 316 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 Q8N402 240 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 TMEM145Q8NBT3 493 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 BBS4Q96RK4 519 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PINK1Q9BXM7 581 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PITHD1Q9GZP4 211 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
COPB1-201ENST00000249923 J3QRE1 110 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ACADMP11310 421 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 TBXA2RP21731 343 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 HSD17B2P37059 387 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 ERVK-21P61565 698 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 RAB40BQ12829 278 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 AGERQ15109 404 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SLC27A4Q6P1M0 643 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SMARCD3Q6STE5 483 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 PLEKHM3Q6ZWE6 761 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 CLDN22Q8N7P3 220 aa9.44□□□□□ -0.9
COPB1-201ENST00000249923 SETD6Q8TBK2 473 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms